Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3809g00016 ATGGCGTTCCTTCTCAAGTGCTTCGGAGGCCGTGGTTCAACTTCTATGCAACAACCTTCCGCAACAATAGAAGATCTATGCCATCGCTTTTCTCTTGCCCAACTTCGAACATCCACCAACGACTTTGACGAAAGCCTGATTATCAAAGAAGACACCTCTTATCTGGCGTACAAGGGTTGCATCTCCATCAATGGCGAACTGAAAGATGTTGTAGTGGAGCGGCTCAAAGGAAAGTTCGTGTACTCAGACTTGCAATTGGTTAAGAACAATATCATATATAGGTGCCAGCTCCACCACCCGAATGTGGTGTCTCTGGTTGGATTTTGCGATGATGAAAATGAAATGATCGTGGTCTATGACTACGTCCCAAACGGATCACTCTATAATCAACTGAAGAGCAAGTCAGCAACAATCTCGTGGAAGAAAAGGCTAGAAATCAGTATAGGGGTGGCGCGTGGATTACACTACCTTCACTCCGGAACCAAACGAACCCTCATTCATCGCAATCCAACACCGAGTGCCATTCTTTTGGATGAGAATTGGGTTCCCAAACTCAGATTTTTCTGTTTCTCTTTAAAAGGACCAAAGTTTTCAGAAAAGGATGTGAGGCCTATAGAGGCAGTATGTAAAGGTACTATTGGATACATCGCTCCTGAGTCCCTTAAACACGCTAACGTCACGCATAAAAGTGACGTCTATTCTTTTGGGGCACTTTTGTTACGACTAATTTGCGGAAAGCCTCTACCCGCAGTTATGTTGCAGAATGAATTTCGTTTTATTAGGGAATTACGTAATTTGGCAGAAACGGGACATGCTGAGGGAATTATTGATCAGAGTTTGATGGGAGAAATAGCAGCTGAGTGTTGGAAATTGTATATGGACATCGCAGAGAGTTGCTTGAGTTTCGATCCCGATGAGAGGCTAGATATGGGAGAAGTTGAAGTGCTACTTGAGCGGGCATTGCAACTACAAGAGGAAGCAGATAACAACCTTGCTTTTCATGCTTCTTGA 1011 0.4392 MAFLLKCFGGRGSTSMQQPSATIEDLCHRFSLAQLRTSTNDFDESLIIKEDTSYLAYKGCISINGELKDVVVERLKGKFVYSDLQLVKNNIIYRCQLHHPNVVSLVGFCDDENEMIVVYDYVPNGSLYNQLKSKSATISWKKRLEISIGVARGLHYLHSGTKRTLIHRNPTPSAILLDENWVPKLRFFCFSLKGPKFSEKDVRPIEAVCKGTIGYIAPESLKHANVTHKSDVYSFGALLLRLICGKPLPAVMLQNEFRFIRELRNLAETGHAEGIIDQSLMGEIAAECWKLYMDIAESCLSFDPDERLDMGEVEVLLERALQLQEEADNNLAFHAS 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3809g00016 336 ProSiteProfiles Protein kinase domain profile. 3 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3809g00016 336 Pfam Protein tyrosine and serine/threonine kinase 68 311 IPR001245 GO:0004672|GO:0006468
Pral3809g00016 336 SUPERFAMILY Protein kinase-like (PK-like) 33 322 IPR011009 -
Pral3809g00016 336 Gene3D Phosphorylase Kinase; domain 1 9 121 - -
Pral3809g00016 336 Gene3D Transferase(Phosphotransferase) domain 1 122 334 - -
Pral3809g00016 336 PANTHER OS07G0166700 PROTEIN 27 324 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3809g00016 Pral-Chr3809 638929 639939 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3809g00016 10 327 Receptor kinase-like Gene Family AT5G38990 38.906 2.90e-62 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pral3809g00016 PK_Tyr_Ser-Thr 4.9e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3809g00016 - - pcin:129318153 343.199