Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3809g00014 ATGAAAGATTTTGAACGCTCTGCCAAACGGCCCTCAATCTCTTGTCTTCTTCTCACCGCATACAGGGGAAGCCCTTTCAACCTCTCGTCTATTCTCTTCTCACCGCATACAGGGGAAGCCCTTTCAACCTCTCGTCTATTCTCTCACCGCATACAGGGGAAGCCCTTTCAACCTCTCGTCTATTCTCTTCTCACCGCATACAGGGGAATGGCGTTCCTTCTCAAGTGCTTCGGAGGCTGTGGTTCAACTTCTATGCAACAACCTTCCGCAACTATAGAAGATCTATGCCATCGTTTTTCTCTTGCCCAACTTCGAAAATCCACCAACCACTTTGACCAAAGCCTGATTATCGAAGAAGTCGGCTTTTATCTGGCGTACAAGGTTTGCATCTCCATCAATGGCGAACCGAAAGATGTTATAGTGGAGCGGCTCGAACGAAAGTTTGTGTACTCAGACCTGCAATTGGTTAAGAACAATATCATATATAGGTGCCAGCTACACCACCCGAATGTGGTGTCTCTGGTTGGATTTTGCGATGATGAAAATGAAATGATCGTGGTCTATGACTACGTCCCAAACGGATCACTCTATAATCAACTGAAGAGCAAGTCAGCAACAATCTCGTGGAAGAAAAGGCTAGAAATCAGTATAGGGGTGGCGCGTGGATTACACTACCTTCACTCCGGAACCAAACGCACCCTCATTCATCGCAATCCAACACCGAGTGCCATTCTTTTGGACGAGAATTGGGTTCCCAAACTCAGTTTTTTCTGGTTCTCTTTAAAAGGACCAAAGTTTTCAGAAAAGGATGTGAGGCCTATAGAGGCAGACGTTGCAGGTAGTATTGGATACATCGCTCCTGAGTCCTACAGGGGCACTAACGTCACGCACAAAAGTGACGTTTTTTCTTTTGGGGCAGTTTTGTTTGAACTAATTTGCGGAAAGCCTCCATTCCCAGTTAGGCGTCAGATTGATTTTCGCGATGTTAAGGAATTGCATAATTTGGCAGAAACAGGACATGCTGAGGAAATTTTTGATCAACATTTGATGGGAGAAATAGCAGCAGAGTGTTGGAAATTGTATATGGACATCACAGAGAGTTGCTTGAGTGAAGATCCCGATGAGAGGCCTGATATGGGAGAAGTTGAAGTGCTACTTGAACGTGCATTGCAACTACAAGAAGAAGCAGATAACAACCTTGCTTTTCATGCTTCTTGA 1218 0.4507 MKDFERSAKRPSISCLLLTAYRGSPFNLSSILFSPHTGEALSTSRLFSHRIQGKPFQPLVYSLLTAYRGMAFLLKCFGGCGSTSMQQPSATIEDLCHRFSLAQLRKSTNHFDQSLIIEEVGFYLAYKVCISINGEPKDVIVERLERKFVYSDLQLVKNNIIYRCQLHHPNVVSLVGFCDDENEMIVVYDYVPNGSLYNQLKSKSATISWKKRLEISIGVARGLHYLHSGTKRTLIHRNPTPSAILLDENWVPKLSFFWFSLKGPKFSEKDVRPIEADVAGSIGYIAPESYRGTNVTHKSDVFSFGAVLFELICGKPPFPVRRQIDFRDVKELHNLAETGHAEEIFDQHLMGEIAAECWKLYMDITESCLSEDPDERPDMGEVEVLLERALQLQEEADNNLAFHAS 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3809g00014 405 ProSiteProfiles Protein kinase domain profile. 111 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3809g00014 405 Gene3D Phosphorylase Kinase; domain 1 80 190 - -
Pral3809g00014 405 Pfam Protein tyrosine and serine/threonine kinase 136 383 IPR001245 GO:0004672|GO:0006468
Pral3809g00014 405 SUPERFAMILY Protein kinase-like (PK-like) 102 391 IPR011009 -
Pral3809g00014 405 Gene3D Transferase(Phosphotransferase) domain 1 191 403 - -
Pral3809g00014 405 PANTHER OS07G0166700 PROTEIN 95 393 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3809g00014 Pral-Chr3809 600225 601561 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3809g00014 82 399 Receptor kinase-like Gene Family AT3G51550 37.888 2.51e-63 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pral3809g00014 PK_Tyr_Ser-Thr 4e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3809g00014 - - pcin:129318153 352.058