Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3809g00012 ATGAGCAAGCGGCAAGAACTTCATTATCCTCGGGAAGTACGTAATTTGGCGGAAACAGTAAAAGCTGGGGGAATTATGGATGAGAGTTTGGTGGGAGAAATAGGAGGAGAGTGTTGGAAATTGTATATGGACATTACGGAGAGTTGCTTGAGTGAAGATCCCAATGAGAGGCCAGACATGGGAGAAGTTGAAGTTCAACTTGAACGTGTTTATAATGACTGGCTTCCCAGCATAAGGATTGATGCCTACTGGGAATGGGAATCCTTCACAAGTGCTTTGGAGGCCCTGCTTCCACTTCTCGGAAAACATCCTCCCACAACAATAGAATATCTGTGCCATCGCTTTTCTCTTTCCCAACTTCGAAAATCCACCGACAACTTTGACGACAGCCGGATTATAGGTGAAGGGCCCTTTGGTGTGGGGTATAGGGCTCGCATCTCCGTCAATGGCCAAATGAAAGATCTTGTAGTGAAAAGGCTTCGGCGAGAAGCGGCGAATTCCTCATACGGGCTCTTACTGTATAAGAACGATATCATATTTAGATGTCAGCTTCACCATCCGAATCTCGTGTCTCTGGTTGGATTTTGCGATGATCAAAATGAAATGATCGTGGTCTATGACTACGCCCCAAACGGATCACTCTATCAGCAACTTTACGAAACAGAGGCTAAGCCAGCAATACGACCATGGAAGAAAAGGCTAGAAATCAGTATAGGAGTGGCGCGTGGATTACACTACCTTCATTCAGGAACCAAACGCACCATCATTCACCGCGATATTACACCGTTTGCCATTCTTCTGGGCGAGCATTGGATTCCCAAACTCAATTTTTTCGGGTTCTCTATAAAAGGACCAAAGTTTTCAGAAAAGGATGTGAAACCCATACAGTTGGAATCCATTGAAGGCCCTGTGGGATACATAGCTCCTGAGTGCATTAGTGGCACTAATGTCACGTATAAAAGTGACGTCTATTCTTTTGGAGTAGTTTTGTTAGAACTCATTTGCGGAAAGACTTTATTCCAGATTGTTCAGCATAAGGGGCGTCATGTTGACAAGACTGCAAGTGTCATTCCATTTACAACGAGTGTGGTTAAGGAAGTCCGTAATTGGGAAGAAAGAGGAAATGCTGGAGGAATTATTGATCAGAGTTTGATGGGAGAAATAGCAGCAGAGTGTTGGAAATTGTATATGGACATTACAGAGAGTTGCTTGAGTGAAGATCCCGATGAGAGGCCTGATATGGGAGACGTTGAAGTCCAACTTGAACGTCTGTTGCAACTACAAGAGGAAGCAGAGACAGCGCTTTAG 1308 0.445 MSKRQELHYPREVRNLAETVKAGGIMDESLVGEIGGECWKLYMDITESCLSEDPNERPDMGEVEVQLERVYNDWLPSIRIDAYWEWESFTSALEALLPLLGKHPPTTIEYLCHRFSLSQLRKSTDNFDDSRIIGEGPFGVGYRARISVNGQMKDLVVKRLRREAANSSYGLLLYKNDIIFRCQLHHPNLVSLVGFCDDQNEMIVVYDYAPNGSLYQQLYETEAKPAIRPWKKRLEISIGVARGLHYLHSGTKRTIIHRDITPFAILLGEHWIPKLNFFGFSIKGPKFSEKDVKPIQLESIEGPVGYIAPECISGTNVTYKSDVYSFGVVLLELICGKTLFQIVQHKGRHVDKTASVIPFTTSVVKEVRNWEERGNAGGIIDQSLMGEIAAECWKLYMDITESCLSEDPDERPDMGDVEVQLERLLQLQEEAETAL 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3809g00012 435 Gene3D Phosphorylase Kinase; domain 1 102 208 - -
Pral3809g00012 435 Gene3D Transferase(Phosphotransferase) domain 1 1 77 - -
Pral3809g00012 435 Gene3D Transferase(Phosphotransferase) domain 1 209 434 - -
Pral3809g00012 435 SUPERFAMILY Protein kinase-like (PK-like) 110 419 IPR011009 -
Pral3809g00012 435 Pfam Protein tyrosine and serine/threonine kinase 131 419 IPR001245 GO:0004672|GO:0006468
Pral3809g00012 435 PANTHER OS07G0166700 PROTEIN 112 428 IPR045272 GO:0004714|GO:0006468
Pral3809g00012 435 ProSiteProfiles Protein kinase domain profile. 127 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3809g00012 Pral-Chr3809 564932 570169 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3809g00012 113 434 Receptor kinase-like Gene Family AT2G39360 38.199 3.06e-66 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pral3809g00012 PK_Tyr_Ser-Thr 2e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3809g00012 - - pcin:129318153 398.282