Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3809g00011 ATGGGAATCCTTCACAATTGCTTTGGAGGCTGTGGTTCCACTTCTCGTAAACAACCTTCCACAACAATCGAACATCTATGTCATCGCTTTTCTCTTTCCCAACTTCGGAAATTGACCAACGACTTTGACGAAAGCCGGATTATGGGTGAAGGGCCCAGAAGTGTGGTGTACAGGGTTTGCGTCTCCGTCGATGGCCAACTGAGAGATATTGCAGTGAAGCGACTCCGACGAGAAGCAGCGATTTCCTTAAACGGGTTCTCACGGTACAAGACCGATATCATATTTATATGCCAGCTACACCACCCGAATCTGGTGTCGTTTGTTGGATATTGCGATGATAAAAATGAAATGATTCTGGTCCACGACTGCGCCCCAAACGGATCACTCTATAATCAACTTCACGAAACAAGGAGCAAGTCGCCAATACGACCATGGAGGAAAAGGCTAGAAATCAGTATAGGAGTGGCGCGTGGGTTGCACTACCTTCACTCAGGAACCAAACGCACCATCCTTCATCGCGATATCAGACCGGCTTCCATTCTTTTGGATGAGAATTGGCTTCCCAAACTGGCACATTTCGGGCTTTGTTTAAGAGGACCAAAGTTTTCAGCAAAGGATATGAAACCCATACGGTTGGAATCCGTTGAAGGCCCTTGGGGATACATAGCTCCTGAGTGCTTTAGTGCTCCTAATGTCACGTATAAATGCGATGTCTATTCTTTTGGGGTCATTTTGTTAGAACTCATCTGCGGAAAGACTTTATCCCAAATTAGTCAGCATAAGGGGCGTCATACTGAAGCTGCAAGTGTTATTCCATTTACATTCAGTGTCGTTAAGGAAGTACGTAATTTGGGAGGAACAGGAAATGCTGAGGGAATTATGGATGAGTGTTTGGTGGGAGAAATAGGAGGAGAGTGCTGGAAATTGTACATGGACATTACAGAGAGTTGCTTGAGTGAAGATCCCAATGAGAGGCCACATATGGGAGAAGTTGAAATTCAACTTGAACGTGTGTTGCAACTACAAGAGGAAGCAGATTCTAACAATACATCCTTGTGA 1059 0.4504 MGILHNCFGGCGSTSRKQPSTTIEHLCHRFSLSQLRKLTNDFDESRIMGEGPRSVVYRVCVSVDGQLRDIAVKRLRREAAISLNGFSRYKTDIIFICQLHHPNLVSFVGYCDDKNEMILVHDCAPNGSLYNQLHETRSKSPIRPWRKRLEISIGVARGLHYLHSGTKRTILHRDIRPASILLDENWLPKLAHFGLCLRGPKFSAKDMKPIRLESVEGPWGYIAPECFSAPNVTYKCDVYSFGVILLELICGKTLSQISQHKGRHTEAASVIPFTFSVVKEVRNLGGTGNAEGIMDECLVGEIGGECWKLYMDITESCLSEDPNERPHMGEVEIQLERVLQLQEEADSNNTSL 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3809g00011 352 Gene3D Phosphorylase Kinase; domain 1 11 122 - -
Pral3809g00011 352 SUPERFAMILY Protein kinase-like (PK-like) 16 335 IPR011009 -
Pral3809g00011 352 Gene3D Transferase(Phosphotransferase) domain 1 124 351 - -
Pral3809g00011 352 ProSiteProfiles Protein kinase domain profile. 42 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3809g00011 352 Pfam Protein kinase domain 43 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3809g00011 352 PANTHER OS07G0166700 PROTEIN 27 342 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3809g00011 Pral-Chr3809 561519 563925 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3809g00011 28 344 Receptor kinase-like Gene Family AT2G39360 38.801 6.28e-69 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pral3809g00011 Pkinase 7e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3809g00011 - - pcin:129318153 441.81