Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3809g00009 ATGATTGTGGTCTATGACTACGCCCCCAACCGATCACTCTATCAGCAGATCCACGGAATAGACAGCAGTTCGCCAATAAGGCCATGGAAGAAGAGGCTAGAAATTAGTATCGGAGTGGCGCGGGGGTTACACTACCTTCACTCAGGAACCAAACGCACCGTCATTCATCGCCATATAACATCGGCTGCCATTCTTCTGGGCGAGAATTGGGTTCCCAAGCTCGGATATTTCGGGCTCTCTTTAAAAGGACCGAAGTTCTCAGCAAGGGATGCGAAGCCCATAAAGTTGGAATCCATTGAAGGTCCCTGGGTATACACGGCTCCTGAATGCTTACGCGCCACCAATGTCACGTATAAAAGTGACGTATATTCATTTGGAGTAGTTTTGTTAGAACTAGTTTGCGGAAAGACTTTATCCCAAATCAGTAATCACGAGTGGCGTCAAGTTGAGAACACTGCAGATTTTTTCCAATTTACGATGAGCGTTGTTCAGAAAGTACGTGACTTGGCAGGAACAGGAAGAGCTGAGGGAATTATTGATGAGAGTTTGGTGGGAGAAATAGGAAGAGGGTGCTGGAAATTGTACATGGACATTACAGAGAGTTGTCTGAATGAAGATCCCAATGACAGGCCTGATATGGGAGACGTTGAAGTGCAGCTTGAACTTCTGTTGCAGCTACAAGAGGATCCAGATTCTAACAGTATAATGATCCCTTGA 717 0.4589 MIVVYDYAPNRSLYQQIHGIDSSSPIRPWKKRLEISIGVARGLHYLHSGTKRTVIHRHITSAAILLGENWVPKLGYFGLSLKGPKFSARDAKPIKLESIEGPWVYTAPECLRATNVTYKSDVYSFGVVLLELVCGKTLSQISNHEWRQVENTADFFQFTMSVVQKVRDLAGTGRAEGIIDESLVGEIGRGCWKLYMDITESCLNEDPNDRPDMGDVEVQLELLLQLQEDPDSNSIMIP 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3809g00009 238 Gene3D Transferase(Phosphotransferase) domain 1 9 235 - -
Pral3809g00009 238 PANTHER OS07G0166700 PROTEIN 1 227 IPR045272 GO:0004714|GO:0006468
Pral3809g00009 238 SUPERFAMILY Protein kinase-like (PK-like) 2 218 IPR011009 -
Pral3809g00009 238 PIRSF ILK 182 231 - -
Pral3809g00009 238 PIRSF ILK 1 169 - -
Pral3809g00009 238 ProSiteProfiles Protein kinase domain profile. 1 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3809g00009 238 Pfam Protein tyrosine and serine/threonine kinase 2 218 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3809g00009 Pral-Chr3809 559051 559767 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3809g00009 1 237 Receptor kinase-like Gene Family AT2G39360 38.397 3.74e-45 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pral3809g00009 PK_Tyr_Ser-Thr 5.6e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3809g00009 - - pcin:129318153 288.115