Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3806g00019 ATGGAACTATCAGAACCCAGACCCAGTCATCCCAACCACCAGCGTCATCAGCAGCAGCCGCCGCAAAATCAGTTACAGTTAGCTTCGTCCCAGGTTGCAGTCCCTCTCGATGGCGGACGAAGAGGAGGAGGAGGTCCCTCGTATTTCATCAACATGGGCCCCACCTCCATCCAGGCTGGCCTCTTTGCTGGTGTCGCAACAACTCCTCCTCTGTCACCATCATCATCTTCTTCTTCTTCGTCATCGTCGTCTTCTTCAGCTCTGGTTCCTCTGGTTGATGCGCCGCCGCTTCGCATCTTCCCTGGACCTGATTCGGCCAGGAGACAACAAGAAGTTCACCAGCAACAATTGTCACTTTCTACAGCGACGGCGGTGGCGAGAGATATAGCTGCGGCGAGCCTGCCGAAAGCCAAGGACAGACACATCAAGGTGGATGGTCGTGGCCGGAGAATTAGAATACCAGCAGGTTGTGCGGCTAGGGTTTTTCAATTAACCAAAGAGCTGGGTCTTAGGTCCGACGGAGAGACGATCGAGTGGCTTCTGCAACAGGCGGAGCCTGCAATCATCGCCGCCACTGGCACCGGCACGAGGGCGGCGAACTTCTCATCAACACTCAACATTTCGCATTGGAACAATGGTGGTTCTTCCACCTTCTTGGCTCCGCCGTCGTCCGCTTCTCATACATTTCATGGAGTTCTGGCTCCGTCGTCTGCTCATCATCATCAACCTTACGAAGATCCGTTCCCGCATTCTACTTTGTTAGGGTTACAGCCTCAGCCACACCCTCAGCAACAAGAGTATCGGCTTCATCATCTATTGCCTGCTGCTCAAATTTCAGAAGGGCTACCTAGTGCTGCCAGCGGATTACCGACTGAGACTTATATGAGAAAACGTTTCCGAGAAGATTTATTCAAAGACGTTAATAAAAAACAAAGCCAATGCGTAGGCAGTGAGAATTCATCTGTGACATTCAATAGTGACTTGCAATTGCAGAAACAATCACAACAGATACTGCAAAAAGCTGGAACTTCGAGTTTGAACGTCCTTCGTCCGCCTACCAATTTCCTCCCCACCACTCCCATGTGGGCGGCTGCCAGTGGCGGCGGAGGAGCTGTCGGTAGCACATTTTGGACGCTAACCTCGGGGAGTGGAGGTACAGGTGTCGCCGCTGCAGAAAGCGGTGGTTCTGGGAGATTCCTGACGGCACAGACTGCTGGTGGCGGCGGTGGCCATGGTGGAAGCATGAATAATCAGTTTCAAAGCTCGCTGCAATTCATGCCCACATTGAATTCCTCCCATGTAGGAGGTCTGCAACTGGCACCAGCGACGTCTTTTTTGCTGCCTAATCAGTCCAACATGGCTCCATTAAATGCGTTTCCCAGTGCTGTTGAAAATGTGAATATTCCAAACCTTGATCATCATCATGGTCATCTTCAAGCTGATGATAATTAA 1452 0.5158 MELSEPRPSHPNHQRHQQQPPQNQLQLASSQVAVPLDGGRRGGGGPSYFINMGPTSIQAGLFAGVATTPPLSPSSSSSSSSSSSSSALVPLVDAPPLRIFPGPDSARRQQEVHQQQLSLSTATAVARDIAAASLPKAKDRHIKVDGRGRRIRIPAGCAARVFQLTKELGLRSDGETIEWLLQQAEPAIIAATGTGTRAANFSSTLNISHWNNGGSSTFLAPPSSASHTFHGVLAPSSAHHHQPYEDPFPHSTLLGLQPQPHPQQQEYRLHHLLPAAQISEGLPSAASGLPTETYMRKRFREDLFKDVNKKQSQCVGSENSSVTFNSDLQLQKQSQQILQKAGTSSLNVLRPPTNFLPTTPMWAAASGGGGAVGSTFWTLTSGSGGTGVAAAESGGSGRFLTAQTAGGGGGHGGSMNNQFQSSLQFMPTLNSSHVGGLQLAPATSFLLPNQSNMAPLNAFPSAVENVNIPNLDHHHGHLQADDN 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3806g00019 483 ProSiteProfiles TCP domain profile. 137 191 IPR017887 -
Pral3806g00019 483 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 77 434 IPR005333 GO:0003700
Pral3806g00019 483 MobiDBLite consensus disorder prediction 68 89 - -
Pral3806g00019 483 MobiDBLite consensus disorder prediction 1 50 - -
Pral3806g00019 483 Pfam TCP family transcription factor 136 237 IPR017887 -
Pral3806g00019 483 MobiDBLite consensus disorder prediction 68 115 - -
Pral3806g00019 483 MobiDBLite consensus disorder prediction 13 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3806g00019 Pral-Chr3806 268853 270304 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3806g00019 129 385 TCP Transcription Factor Family AT1G72010 41.573 5.66e-37 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pral3806g00019 TCP 1.2e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3806g00019 - - pcin:129301586 332.413