Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3806g00008 TTTACTGCAGGTGATATCCCTTCTTTCATTTTCAATTTGACAAATCTAGAAGAGTTTGATGTTTCTCAAAATCAACTAATTGGTGGCATACCAATAAAGTTTGAATATTTATATTCTCTTTCTCTTCTAAATGTCTCCCAAAACAAGCTGAGTGGAATTGTGCCTTACTTTAGGAACAGGTTCGATGTTGAATTTCATGTTGACTTTAGTCACAACAAAATCAATAGACTATTACCATATGGGATATGCACTTTTCCATCAAAATGTAGCATTGATTTGAGCTACAATAATATCTCTGGTAATATACCTAAAGAGCTTAGTGAGCTGCTCTACATCAACTTGTCATACAATCATCTCAGCGGCTATGTCCCTAGTGAAGTTTATAGCTCTTTTCCTCATGACATTTTAAATGGTAATAAAGAACTACTTGGTCTAGAGAAGATATATGATTCTTCTAAAGATTCAAAGTCTTTGATGAAAATCATTATTCCTTTGACAATTTTTGTTGTCATCATATTTGTTGGGGGTTTCATCTGGTTTCATTTTTTCAAAAAGAGCAAGAAATTCATAATTGAGACAAGAGAAACAAAAAATGGAGATTTGTTTTCCATATGGAATTATGATGGAAAAATTGCATATGAAAATATTATAGAAGCAACAGAGGACTTTGACATCAAATATTGTATTGGAACCGGTTCCTATGGAAGTGTTTATAGAGCACAACTTCCTAGTGGCAAAATTGTAGCATTAAAAAAACTCCATAGAAGAGAATATGGAAACACATCTTTTGCCAAGAGTTTTCACAATGAAGTGAAGATGTTGACTGAAATTCGACATCGCAATATTATAAAGCTTCATGGTTTTTGCATACATAATCAGTGCATGTTTCTCATCTATGAATACATGGAAAGAGGAAGCCTTTTTTATGTGTTGAATAATGATGACGAAGCTAAAGAGTTGGATTGGAGTAAGAGAGTGAATGCCATCAAAGGAATAGCAAATGCTTTGTTCTACATGCATCATGATTGCATTCCTCCAATTATCCATCGAGACATAACAAGTAGTAATATATTGTTCAACTCAAAGATGGAGGCTTTTCTATCTGACTTTGGCACAGCTAGAATCATTGATTCAGATACATCTAATCAAACTCTTCTAGTTGGTACTTATGGTTATGTTGCTCCAGAGCTTGCATACACCTTGACTGTGACTGAAAAATGTGATGTTTATAGTTTTGGAGTGGTTACAATGGAAACAATTATGGGAAGACATCCTGGAGATTTAATATCATCTTTTTCAAAGGCCAACACTGAAATCATTTTGCTAAAGGATGTGTTAGACCCACATGTCCAGCTGCCATCACAAAAAGATGCAAGAGATGTGATTCTTTTGGTCATAATAGCATTAGCATGCTTAAATCCATCTCCCAAATCTCGACCAACAATGCAACAAGTGTCTCAAAGGCTTTTATCCTCCGACTTGCCACTAACCACTCCTTTTAATGATATCTCAATCCAGCATTTACTAAATCAAGATATGCGAATAATCTAG 1551 0.3436 FTAGDIPSFIFNLTNLEEFDVSQNQLIGGIPIKFEYLYSLSLLNVSQNKLSGIVPYFRNRFDVEFHVDFSHNKINRLLPYGICTFPSKCSIDLSYNNISGNIPKELSELLYINLSYNHLSGYVPSEVYSSFPHDILNGNKELLGLEKIYDSSKDSKSLMKIIIPLTIFVVIIFVGGFIWFHFFKKSKKFIIETRETKNGDLFSIWNYDGKIAYENIIEATEDFDIKYCIGTGSYGSVYRAQLPSGKIVALKKLHRREYGNTSFAKSFHNEVKMLTEIRHRNIIKLHGFCIHNQCMFLIYEYMERGSLFYVLNNDDEAKELDWSKRVNAIKGIANALFYMHHDCIPPIIHRDITSSNILFNSKMEAFLSDFGTARIIDSDTSNQTLLVGTYGYVAPELAYTLTVTEKCDVYSFGVVTMETIMGRHPGDLISSFSKANTEIILLKDVLDPHVQLPSQKDARDVILLVIIALACLNPSPKSRPTMQQVSQRLLSSDLPLTTPFNDISIQHLLNQDMRII 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3806g00008 516 Pfam Protein kinase domain 227 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3806g00008 516 Gene3D Transferase(Phosphotransferase) domain 1 302 495 - -
Pral3806g00008 516 SUPERFAMILY L domain-like 4 125 - -
Pral3806g00008 516 Gene3D Phosphorylase Kinase; domain 1 184 301 - -
Pral3806g00008 516 FunFam MDIS1-interacting receptor like kinase 2 302 494 - -
Pral3806g00008 516 PANTHER LEUCINE RICH REPEAT KINASE 2 3 496 - -
Pral3806g00008 516 ProSitePatterns Tyrosine protein kinases specific active-site signature. 347 359 IPR008266 GO:0004672|GO:0006468
Pral3806g00008 516 ProSitePatterns Protein kinases ATP-binding region signature. 229 251 IPR017441 GO:0005524
Pral3806g00008 516 SUPERFAMILY Protein kinase-like (PK-like) 206 489 IPR011009 -
Pral3806g00008 516 Gene3D Ribonuclease Inhibitor 2 148 IPR032675 -
Pral3806g00008 516 FunFam Leucine-rich repeat receptor protein kinase MSP1 185 301 - -
Pral3806g00008 516 ProSiteProfiles Protein kinase domain profile. 223 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3806g00008 Pral-Chr3806 126621 128270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3806g00008 3 395 Receptor kinase-like Gene Family AT4G08850 41.990 5.84e-99 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral3806g00008 Pkinase 8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3806g00008 - - pcin:129297054 739.954