Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3806g00002 ATGCGCTCGAGAGGGGGGGGGGGGAGAGACAGTAATATTCCAATCCCTCCAAATTCAATAACAAAAAAACCCCCAGAATTTAATGCAGCAGCTGAGATTCCCACCCACCCTTTGCCCTCCAAAATCTCTCCCCAATTTCCTCCTCATTCCCCTTCTCCCTCTCCTCTTACTTCTTCTTCACCTTCTCCGTCAAATGGACACTTTCAAAATCTCACTTGGTTCTTCTGGTTCTTCTTCTTATTTGTCTTTTGCTTCCCTTTTGCCCCCATGTCCCTCTTCATCAACATTGGCTTCGGCTATTCCATTGCCATCGCCCTCGCCTTCCTCGTTCTTGCCTCTACGCTCATTCTCTCTTTCTACCTCTGTTGCCGCAACCGCAACCCCAACCCCACTTCGCATTCGAACCCGAATCCGAATATGAACCCATCTGGGGCGAATGTGGAATCCGAGGGTATTGTTCTGCCTCGGGTGATTTTTGTGGCGGAGGAGGAGGATGATAACGAGAGCTCCGTCGTGGGGCTCGACGAGAACGTTATAAACTCGTACCCCAGGTTCCAGTACAGTAGGGGTGCTATGGGTGTTGGAAGCAGTACGATGTGTTCGATCTGTTTGTGTGAGTATAGGGATTCGGAGATGCTGAGGATGATGCCGGAGTGTCGCCATTATTTCCACCTCTTGTGCCTTGACGCTTGGCTTAAACTAAATGGGTCGTGCCCTGTTTGTCGGAACTCGCCGCTCATGACGCCGATTTCGACGCCTCTGCAAGAAGTGGTGCCGCTCTCTCAGTACCCGGCTGACCGGAGGCGACGGAGGTGA 816 0.5184 MRSRGGGGRDSNIPIPPNSITKKPPEFNAAAEIPTHPLPSKISPQFPPHSPSPSPLTSSSPSPSNGHFQNLTWFFWFFFLFVFCFPFAPMSLFINIGFGYSIAIALAFLVLASTLILSFYLCCRNRNPNPTSHSNPNPNMNPSGANVESEGIVLPRVIFVAEEEDDNESSVVGLDENVINSYPRFQYSRGAMGVGSSTMCSICLCEYRDSEMLRMMPECRHYFHLLCLDAWLKLNGSCPVCRNSPLMTPISTPLQEVVPLSQYPADRRRRR 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3806g00002 271 MobiDBLite consensus disorder prediction 40 58 - -
Pral3806g00002 271 SMART ring_2 200 241 IPR001841 -
Pral3806g00002 271 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 160 246 IPR013083 -
Pral3806g00002 271 ProSiteProfiles Zinc finger RING-type profile. 200 242 IPR001841 -
Pral3806g00002 271 PANTHER RING-H2 FINGER PROTEIN ATL67 91 270 IPR044289 GO:0016567|GO:0016740
Pral3806g00002 271 SUPERFAMILY RING/U-box 199 246 - -
Pral3806g00002 271 MobiDBLite consensus disorder prediction 1 61 - -
Pral3806g00002 271 CDD RING-H2_EL5-like 200 242 - -
Pral3806g00002 271 Pfam Ring finger domain 199 242 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3806g00002 Pral-Chr3806 9151 10516 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3806g00002 97 268 C3H Transcription Factor Family AT2G35910 40.116 1.18e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3806g00002 - - qlo:115983169 257.299