Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3804g00019 ATGGCAATTGTAGCAACCTCATCCTCATCTCCCACCATGAGCCTCAGCCACGACGATACCACCACAACCGCCGCCACCGATGGCTGCGACACGCTCAAACGCCCCGACGAGGACGATGACGACAACCACCAGCACGACATGGTCATGCCCGGCTTCCGCTTCCACCCAACCGAAGAAGAACTTGTTGAATTCTACCTTCGCCGGAAAGTCGAAGGCAAGCGTTTCAACATCGAGCTCATCACCTTCCTCGATCTCTATCGCTACGATCCATGGGAACTCCCTGCTATGGCGGCGATCGGAGAGAAGGAGTGGTACTTCTACGTTCCGAGGGATAGGAAGTATCGGAACGGTGACCGGCCGAACAGAGTGACGACGTCTGGGTACTGGAAGGCGACCGGAGCTGATAGAATGATTCGAGCGGCGGAGAGTTCGAGGTCAATCGGGCTGAAGAAAACTCTAGTTTTCTATTCTGGAAAAGCTCCAAAAGGGATTCGAACCAGTTGGATTATGAATGAGTATCGTTTGCCTCACCATGAAACCCAGCGCTTCCAGAAGGCTGAGATATCTCTGTGTCGAGTTTACAAGAGACCTGGTGTAGAAGACCATCCCTCTCTTCCTCGCAGTCTCCCTACCAGACCCTCCTCATCATCCACTACATCAAAACCTTCTTCAGACAAGAATCATTATAATAATAATAGTAAGCACAACATCAACCTTGCCCCAGATATGTTTCATCATCAAAACATGGGATTTCTGGAACAGCCTCAGACTCATCATCATCGAGATCAGCAAATTACCAACGAAACTGATCAGGGAAGCAGTAGTAGTACTGCTGCTACAACTACCACCACCACCACCAGTAACAACAACAATAATTCGATATTAATGATGGATGATTTCAATAGGCTAGTGACTTACAATAATAACCAACAATATTTACAATACTATAACAGTGGTATTATGAATCCTTCTCCTTCTGAAAATCATCATCATCTTCTTCCTCTTCATCTTCATCATCATCATCTTCAGTTCTCTAATCTGCTATTGCAGCAGCAGCCACAAGTTCAGCAACCAACGGTGGCTCTGAATAGTTCGGTTCCGATTACTTCTTTTTCTGACAGATTGTGGGAGTGGAATCCATTAATCCCTGAAGCTACAAACCGAGAGTTCAGCAACATGTCCTTCAAGTAA 1191 0.4677 MAIVATSSSSPTMSLSHDDTTTTAATDGCDTLKRPDEDDDDNHQHDMVMPGFRFHPTEEELVEFYLRRKVEGKRFNIELITFLDLYRYDPWELPAMAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRAAESSRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPHHETQRFQKAEISLCRVYKRPGVEDHPSLPRSLPTRPSSSSTTSKPSSDKNHYNNNSKHNINLAPDMFHHQNMGFLEQPQTHHHRDQQITNETDQGSSSSTAATTTTTTTSNNNNNSILMMDDFNRLVTYNNNQQYLQYYNSGIMNPSPSENHHHLLPLHLHHHHLQFSNLLLQQQPQVQQPTVALNSSVPITSFSDRLWEWNPLIPEATNREFSNMSFK 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3804g00019 396 SUPERFAMILY NAC domain 48 196 IPR036093 GO:0003677|GO:0006355
Pral3804g00019 396 MobiDBLite consensus disorder prediction 255 294 - -
Pral3804g00019 396 FunFam NAC domain-containing protein 35 57 199 - -
Pral3804g00019 396 Gene3D NAC domain 57 199 IPR036093 GO:0003677|GO:0006355
Pral3804g00019 396 MobiDBLite consensus disorder prediction 208 238 - -
Pral3804g00019 396 MobiDBLite consensus disorder prediction 267 294 - -
Pral3804g00019 396 MobiDBLite consensus disorder prediction 199 238 - -
Pral3804g00019 396 MobiDBLite consensus disorder prediction 1 44 - -
Pral3804g00019 396 MobiDBLite consensus disorder prediction 30 44 - -
Pral3804g00019 396 Pfam No apical meristem (NAM) protein 50 175 IPR003441 GO:0003677|GO:0006355
Pral3804g00019 396 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 46 282 - -
Pral3804g00019 396 MobiDBLite consensus disorder prediction 1 28 - -
Pral3804g00019 396 ProSiteProfiles NAC domain profile. 48 196 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3804g00019 Pral-Chr3804 155563 159258 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3804g00019 47 396 NAC Transcription Factor Family AT2G02450 52.255 4.35e-119 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral3804g00019 NAM 3.6e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3804g00019 - - pcin:129305223 547.74