Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral379g00003 ATGCTGCTTCACCAAAGAAACTCTTTGCTGAGATCTAATACTTCTCCCTTTTCTGATTCTCAAATGCTCACTTTCTCTTCTCCCAAGTCGGAGCCTCAGCTAACGGACAAGGCCTCCCCGAATGCCGCATTGCCCTTTTCTTATCACCAACTAGCTGCTTACACCCGGAATACAGGTTACGGCTCTGGAGGCATGCACGGGGTTTTAACAACCAGAGGGCCATTCACTCCGTCCCAGTGGATGGAGCTGGAACACCAGGCCTTGATCTACAAGTACATCACTGCAAATATGGCCGTACCTTCTCATCTCCTCATCCCTATCAGAAAAGCTCTCGATTCTGCTGGCTTCAGTAACTTTTCCAACGGACTCCTGAGAACTAATACACTGGGATGGGGAGGTTTCCATCTGGGATTCTCGAACAACACTGATCCCGAACCGGGGAGGTGTAGGAGAACAGATGGGAAGAAATGGCGGTGCTCAAGAGATGCCGTTGTGGACCAGAAGTACTGTGAGCGCCACATGAACAGAGGCCGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAATCAGGCCATGCCGTCTCTGGCGCCACCACTACCAATAGTGCCTCAAAGCTCATCCCTAATGCTTCCTCCTCTGCCTCAGTAGTGGTGCCAGGCAACGCTGCGTCTAATACTCTTTCCTTTGCCCATCATCAATCCAAGAATTTGCAACCTCTTTCATCTCATACTTCTGCTCCTACCAACATCGACAGAATGTTCATGAACAACAAGGAGAATGCCATTGAGAGAGTGCAGGACGGCTCTGCTCTTCCAATGCTGCCTCCCACCCTTGATCTGAAGCCCAAGGAAAACCCTTATATGATACAAAAGGAGCAAATCCCGTACGAAAAATCGTCCAGGAATGAGTTTGGGCTTGTCACTTCTGACTCCCTACTCAACCCTTCACATAAAAGCTTTGGTTCTTCGCAAAACCCCTCTTACAGAGATGCAGAGTCACAGCAATCCCTTCGTCATTTCATGGATGACTGGCCCAAACTCGACATGCAATCCGATAGGACCCAGCTTTCGATATCTATCCCCATGGCCTCTTCAAATTTCATGTCATCCACTTCCTCTGCTACCAATGAAAAAGTCACATTGTCACCTCTTCGACTATCAAGGGAGCTAGATCCAATTCAAATGGATTTGGGGGTGGGAATTGGTCTGAATGAATCAAGTAACAGGCAGGCAAATTGGATTCCAATTGCTTGGGAAAGTTCCATGGGGGGTCCTCTTGGTGAGGTTCTTCATCTTAGCAGCAATACAAGTGATTGCTCCAAGAACTCATCTGCTCTTAACCTCATGACAGATGGTTGGGAAAATAGTTCTTCCTTAGGTTCATCTCCAACGGGGGTCTTGCATAAGACCGCGTTTGGATCAGTTTCCAATAGCAACTCTGGGAGCAGTCCGCAGGCTGAGAATAATAAAGGACTCGAAGGGGCCAGCTTGTGCAACGATCTGCTTGGTTCCACTCTTGGCAATTCCTCCTCTTTGCCCACCTTGTAA 1545 0.4861 MLLHQRNSLLRSNTSPFSDSQMLTFSSPKSEPQLTDKASPNAALPFSYHQLAAYTRNTGYGSGGMHGVLTTRGPFTPSQWMELEHQALIYKYITANMAVPSHLLIPIRKALDSAGFSNFSNGLLRTNTLGWGGFHLGFSNNTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEGQSGHAVSGATTTNSASKLIPNASSSASVVVPGNAASNTLSFAHHQSKNLQPLSSHTSAPTNIDRMFMNNKENAIERVQDGSALPMLPPTLDLKPKENPYMIQKEQIPYEKSSRNEFGLVTSDSLLNPSHKSFGSSQNPSYRDAESQQSLRHFMDDWPKLDMQSDRTQLSISIPMASSNFMSSTSSATNEKVTLSPLRLSRELDPIQMDLGVGIGLNESSNRQANWIPIAWESSMGGPLGEVLHLSSNTSDCSKNSSALNLMTDGWENSSSLGSSPTGVLHKTAFGSVSNSNSGSSPQAENNKGLEGASLCNDLLGSTLGNSSSLPTL 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral379g00003 514 MobiDBLite consensus disorder prediction 1 37 - -
Pral379g00003 514 Pfam QLQ 74 108 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pral379g00003 514 PANTHER GROWTH-REGULATING FACTOR 5 21 365 IPR031137 GO:0005634|GO:0006351|GO:0032502
Pral379g00003 514 MobiDBLite consensus disorder prediction 314 333 - -
Pral379g00003 514 MobiDBLite consensus disorder prediction 470 491 - -
Pral379g00003 514 Pfam WRC 144 186 IPR014977 -
Pral379g00003 514 ProSiteProfiles WRC domain profile. 143 187 IPR014977 -
Pral379g00003 514 MobiDBLite consensus disorder prediction 1 39 - -
Pral379g00003 514 ProSiteProfiles QLQ domain profile. 74 109 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pral379g00003 514 SMART QLQ_2 73 109 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pral379g00003 514 MobiDBLite consensus disorder prediction 173 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral379g00003 Pral-Chr379 19674 23279 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral379g00003 3 472 GRF Transcription Factor Family AT2G22840 42.800 2.34e-95 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Pral379g00003 WRC 4.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral379g00003 - - pcin:129304243 947.577