Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3798g00020 ATGAAATTGGCAGACCTGATAGACCAAAATGCGGAAGAACTAGCAGCACTAGACGCCATAGACGCGGGAAAGCTGTACCGGTGGAGTAAGACGGAGATTTCTTCAGTCGCAAATATGCTACGTTACTATGCGGGTGCTGCGGATAAAATCCATGGAGAGGTATTGAAGATGTCAAGAGAGTTCCACGCCTACACTCTGCTCGAACCCATTGGTGTGGTGGGTCACATCATTCCCTGGAACTTCCCCAGCACCATGTTCTTCGCCAAGGTCAGCCCTTCCTTGGCCGCCGGCTGCACCATGGTCGTCAAACCCGCCGAGCAAACTCCTCTCTCTGCTCTCTTCTACGCTCACCTCGCTAAGCTGGCTGGAATACCAGATGGTGTGCTTAATGTAATAACTGGCTTTGGCCCAACGGCTGGCGCTGCTATAAGCTCGCATATGGACATTGATAAGGTTAGCTTTACTGGTTCAACACAAGTAGGACGGGAGGTGATGCAGGCTGCGGCTAAGAGTAATTTGAAACAAGTTTCACTGGAATTAGGAGGCAAATCACCCATCATTATATTTGATGATGCTGATGTGGACAAAGCTGTCGAGCTTGCACTCATTGGAGTCCTCTATAACAAGGGAGAAATCTGTGCTGCAGGCTCTCGTGTGTTTGTTCAAGAAGGCATATATGATGAGTTTGAGAAGAAGCTGGTGCAGAAGGCAAAAGCTTGGGCAGTTGGAGACCCTTTTGATCCTAATGTTCAGCAAGGTCCTCAGGTAGATAAGAAGCAATTTGAAAAAATTTTATCATACATAGAGCATGGAAAGAGAGAAGGAGCCACCTTGCTGACTGGGGGTAAGGCAGTGGGCAATCGGGGATACTACATAGAACCTACAGTGTTCATTAATGTTGAGGAGGACATGGTGATAGCACAAGATGAAATATTTGGGCCTGTCATGGTGCTAATGAAGTTCAAAACGATGGAGGAGGCAATAAAGAGTGCGAACAACACAAAATATGGGTTAGCAGCAGGCATAGTGACGAAGAATATTGATATAGCAAACACAGTGTCGAGATCCATAAGAGCAGGAACCATTTGGATCAACTGCTATTTTGCATTTGGGGATGATGTTCCTTTCGGAGGGTACAAGATGAGTGGATTTGGGAAAGAACATGGAATGGAAGCCGTTCACAAGTATCTCCAAGTTAAGTCTGTTGTCACTCCCATTTACAATTCTCCTTGGCTCTGA 1239 0.4649 MKLADLIDQNAEELAALDAIDAGKLYRWSKTEISSVANMLRYYAGAADKIHGEVLKMSREFHAYTLLEPIGVVGHIIPWNFPSTMFFAKVSPSLAAGCTMVVKPAEQTPLSALFYAHLAKLAGIPDGVLNVITGFGPTAGAAISSHMDIDKVSFTGSTQVGREVMQAAAKSNLKQVSLELGGKSPIIIFDDADVDKAVELALIGVLYNKGEICAAGSRVFVQEGIYDEFEKKLVQKAKAWAVGDPFDPNVQQGPQVDKKQFEKILSYIEHGKREGATLLTGGKAVGNRGYYIEPTVFINVEEDMVIAQDEIFGPVMVLMKFKTMEEAIKSANNTKYGLAAGIVTKNIDIANTVSRSIRAGTIWINCYFAFGDDVPFGGYKMSGFGKEHGMEAVHKYLQVKSVVTPIYNSPWL 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3798g00020 412 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 206 217 IPR016160 GO:0016491
Pral3798g00020 412 FunFam NAD/NADP-dependent betaine aldehyde dehydrogenase 1 201 - -
Pral3798g00020 412 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 178 185 IPR029510 GO:0016491
Pral3798g00020 412 SUPERFAMILY ALDH-like 2 408 IPR016161 GO:0016491
Pral3798g00020 412 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 2 402 IPR016162 GO:0016491
Pral3798g00020 412 Pfam Aldehyde dehydrogenase family 2 402 IPR015590 GO:0016491
Pral3798g00020 412 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 402 - -
Pral3798g00020 412 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 184 373 IPR016163 GO:0016620
Pral3798g00020 412 FunFam Aldehyde dehydrogenase, putative 374 400 - -
Pral3798g00020 412 FunFam Aldehyde dehydrogenase3 182 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3798g00020 Pral-Chr3798 128063 130161 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3798g00020 2 412 Aldehyde Dehydrogenase Gene Family AT3G24503 72.155 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3798g00020 K12355 - gmx:100817721 721.85