Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3798g00017 ATGGGGGACGACCACGCAGTGAACTTATCGGAGTCAAGAGGTTTCATCAGGAAATTCAAAGCAGGATTGAAAGAAACGTTTTTCCCAGACGATCCGTTCAGGCAGTTCAGGAACGAGACCGAGGGTCGTCGGAGATCCATAAAAGCTTTGCAGTACTTCATTCCCATCTTCGAGTGGCTTCCCAATTACTCTTTCCGTCTCTTCCTCTCCGACCTGCTCGCCGGCCTCACCATCACCAGCCTCGCCATCCCTCAGGGCATTAGCTACGCCAAGCTCGCCGCCATCCCTCCCATCGTCGGCCTCTATACGGCCTTCGTTCCGCCTATTATATACGCCGTTTTCGGGAGCTCAAGGCACGTGGCAGTGGGTCCGATCGCATCGTGCTCCTTGATCATATATGAGAGTATTTCGAGCGTAGTATCTCCGGACGACAATCCAGTGTTGTATCTTCATTTGGTTTTCACATCCACCTTCATCACTGGTGTGTTCCAGGCTGCTCTGGGTGTTTTAAGGCTGGGGATATTGGTGGATTTCTTTTCGCATTCAACTATTACAGGCTTCATGACTGGCACCGCCATCATTCTCATATTCCAACAATTGAAGGGCTTGTTTGGCCTCAAACATTTCACCACTAAAACCAACGTCCAAGGTGTTATCCGCGCCATCTGGCGCTACAGATCCGAGATAAGGTGGGAGACTACTGTTCTTGGTCTGGTGCTTCTTGCTTTCTTGCAGTTCACTAGATTCGTGAAGTACAAAAATCCAAAACTCTTTTGGGTACCAGCTCTGGGTCCAATCATAACGGTCGTGGTTTCTGGCGTTTTCACTTTCCTTGTTAAAGGCCAAGATCATGGAATTCAAATTGTGGGTCACCTGGACAAAGGAATCAATCCTCCCTCCATTCACTTGTTAAACTTTGACTCTCGGTATATACCATCGGTGTTGAAAGCTGCCTTAATCACAGGCATTTTGTCCTTGGCGGAAGGCATAGCAATAGGAAGGAGTTTTGCTGTGATGGATAATACACCTCATGATGGAAACAAGGAGATGATAGCATTTGGCCTCATGAACCTGTGCGGTTCTTTCACTTCATGCTACTTGACAAGTGGACCGTTTTCTAAGACTGCGGTGAATTACAACGCAGGTTGTAAGACAGCCTTTTCAAACATAGTACAATCGATTCTAATAGCATTAGCACTTATATTCCTAGCTCCTCTCTTCGGTTACACTCCTCTGGTGGCTCTAGCTGTGATTATTATTTCTGCAATGATTGGCCTCTTGGACTACCACGAGATGGCTCACCTCTTCAGAGTTGATAAGTTTGATTTCCTCATCTGCATGGCTGGCATTCTTGGGGTCGCCTTTATAAGCATGGACATCGGTCTCGCAATGTCCGTGGGGCTTGCTTTGTTGAGAGCACTCTTATATGTGGCTCGACCTGCCACTTGTAAACTGGGAAGGTTATCTGATTCGGGTTTGTATCGCGACGTGGAGCAGTATCCAAACTCATCGAACGTCCACGGCGTCCTAATTATACAAATTGGTTCTCCTCTTTACTATGCAAACTCCAATTATATCAAAGAAAGGATTTTGAGGCACATCCGAAGTGAGCAGGCCTCTGGAGATTCCGTTGAGCACCTTATACTCGATTTTTCAGGAGTTACATCGATCGATATGACTGGCATCAAAGGATTGTTGGAGGCACGAAGAGTATTGGAGAAAAATGATATACAGATATTGATAGTGAATCCAAGACTGGAGGTAGTAGAAAAGCTAGTGACATCTCACTTTGTGGACACCATTGGGAGGGAGTCTTTCTACTTGACTATAGATGATGCGGTGATGGCAACTCAATATTCTCTCCGAAAATCCAGAAAAGCTGACACAATTATCTGA 1896 0.4626 MGDDHAVNLSESRGFIRKFKAGLKETFFPDDPFRQFRNETEGRRRSIKALQYFIPIFEWLPNYSFRLFLSDLLAGLTITSLAIPQGISYAKLAAIPPIVGLYTAFVPPIIYAVFGSSRHVAVGPIASCSLIIYESISSVVSPDDNPVLYLHLVFTSTFITGVFQAALGVLRLGILVDFFSHSTITGFMTGTAIILIFQQLKGLFGLKHFTTKTNVQGVIRAIWRYRSEIRWETTVLGLVLLAFLQFTRFVKYKNPKLFWVPALGPIITVVVSGVFTFLVKGQDHGIQIVGHLDKGINPPSIHLLNFDSRYIPSVLKAALITGILSLAEGIAIGRSFAVMDNTPHDGNKEMIAFGLMNLCGSFTSCYLTSGPFSKTAVNYNAGCKTAFSNIVQSILIALALIFLAPLFGYTPLVALAVIIISAMIGLLDYHEMAHLFRVDKFDFLICMAGILGVAFISMDIGLAMSVGLALLRALLYVARPATCKLGRLSDSGLYRDVEQYPNSSNVHGVLIIQIGSPLYYANSNYIKERILRHIRSEQASGDSVEHLILDFSGVTSIDMTGIKGLLEARRVLEKNDIQILIVNPRLEVVEKLVTSHFVDTIGRESFYLTIDDAVMATQYSLRKSRKADTII 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3798g00017 631 PANTHER SULFATE TRANSPORTER 17 627 IPR001902 GO:0016020|GO:0055085
Pral3798g00017 631 Gene3D STAS domain 479 620 IPR036513 -
Pral3798g00017 631 ProSiteProfiles STAS domain profile. 499 617 IPR002645 -
Pral3798g00017 631 Pfam Sulfate permease family 68 448 IPR011547 GO:0016020
Pral3798g00017 631 Pfam STAS domain 500 613 IPR002645 -
Pral3798g00017 631 SUPERFAMILY SpoIIaa-like 504 614 IPR036513 -
Pral3798g00017 631 NCBIfam sulfate permease 55 613 IPR001902 GO:0016020|GO:0055085
Pral3798g00017 631 ProSitePatterns SLC26A transporters signature. 97 118 IPR018045 GO:0008271|GO:0008272
Pral3798g00017 631 CDD STAS_SulP_like_sulfate_transporter 500 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3798g00017 Pral-Chr3798 106895 110838 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3798g00017 5 625 Inorganic Solute Cotransporters AT5G19600 59.903 0.0 784
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3798g00017 K17471 - qsa:O6P43_007946 867.455