Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3798g00016 ATGAAGAAGAACATCTTCTCCATCCCTCTCTGCCACTCTCAACTCCTTCTTCTTCCCTTCTTCCTCGCCACATTATCTCTCTCCGCTTCACTCCATCTTCACATCACCACCAATGCAGCTCCCACTCACTCCCCCTCGCAGCGTCAACTTCTCTACTACAGAGACCAGTTCGGTGACAGAGGAGAGCTCGTGACCGTCGACCCTTCTTTCGTTTTCGAAAATGATCGCATTAGAAACGCTTACATTGCTTTACAAGCTTGGAAGGAAGCCATTCACTCTGATCCCCGAAATTTCACTGCTAACTGGGTTGGACCCAATGTCTGCAACTACACTGCCGTTTACTGTGCTCCCGCGCCGGATAATCCCAGGATCCGTACAGTTGCCGGCATTGATCTCAACCACGGCGACATTGCGGGCTACTTGCCTCGAGAGCTTGGGCTTCTTGCTGATCTTGCTCTGTTCCACGTTAACTCTAACAGGTTCTGTGGTACTATTCCCCATGAGTTTCGAAAACTGAAACTGCTCTTTGAACTGGATCTTAGTAACAATAGGTTCGCCGGGAAGTTCCCGGAGGTGGTTTTGAGTCTTCCCTCCCTCAAGTTCTTGGATCTGAGGTATAATGAATTTGAAGGGACTGTGCCCAATGAACTCTTCGACAAGGATCTGGATGCGATCTTCATTAATAACAACCGGTTTGCGTTCGACCTTCCTGACAATTTTGGGAACTCTCCCGTGTCGGTCATCGTCCTCGCTAACAACAGGTTCCATGGCTGCATCCCGGCGAGCTTGGGCAATATGTCAAATCTCAACGAGATTATTCTGATGAACAATGCCTTCCGTTCGTGCTTGCCGTCCGAGATTGGGAGGCTGAAGAATTTAACAGTGTTTGATGTGAGCATTAATCAGCTGTTGGGTCCCCTGCCAGACACCATTGGAGGTATGGTCAGTCTCGAGCAGCTGAATGTAGCTCACAATCTGCTCTCTGGGAAGATTCCTGCCGGCATTTGCATGCTGCCCAACCTACAGAACTTTACGTACTCTTATAACTTCTTCACTGGCGAGCCACCGGCGTGCTTGGCTCTGCCAGCTTTTGATGACCGAAGAAATTGCTTGCCGGCGAGGCCACTGCAGAGGTCAGCAGCTCAATGTATGGCGTTCTTGTCTCGACCAGTTGATTGTAACTCGTTTAAATGTAAACCCTTTGGTCCTTCGCCATCGCCCGGGGTGGTTCCTTCGCCACCTTCACAAAGTTCTCCGCCGTCCCCTCCGGGGGTTCCATCACCTCCCTCACCTAGTTCACCTGCGCCATCACCGGGAGTGGGTCATTCACCACCTTCACCATCGTCGGGAGTGGTTCCTTCACCACCTTCACAAGGTTCACCACCGCCATCGCCTGAAGTGGTTCCTTCACCTCCAGAAATTTCACCTTCGCCACCGGGTGTTTCGCCTTCTCCACCAGTTTACTCCCCGCCATCACCTTCAAACCCAACTCCACCATTTTCTTCTTCACCACCATCTTCACCAGCTTACTCTCCACCATCCCCTTCTAGCCCAACTCCACCATCGTCTTCTTCACCTCCATCTTCACCAGTTTACTCTCCGCCATCACCTTCAAGCCCAACCCCACCATCGTCTTCTTCACCTCCATCTTCCCCAGTTTACTCTCCGCCATCACCTTCAAGCCCAACCCCACCATCGTCTTCTTCACCTCCATCTTCCCCAGTTTACTCTCCGCCATCTCCTTCGAGCCCAACTCCACCATTTTCTTCTTCACCTCCATCTTCACCAGTTTACTCTCCGCCATCTCCTTCAAGTCCAACTCCGGTTTATTCATTGCCTCCGCCGCCGCCGCCTAGCTATTCCTCATCAACTCCATCACCTCCGCCTCCAGGTTATTCACTCCCTCCACCTTCCCCACCTTCATCATCGCCACCTAGCTATTCACCACCACAGCCACCAAATCCAACACCTCCCTATTATGTCTGGTCTCCACCACCGTCACCTCCAAATTCACCATCAACAACGCCTCCCTATTATCATAACACGCCGCCGTTGCCCCAACATTCTCCTCCACCAGGTAACTCACCTTCGCCACCTATTTATCCCTATTTATCACCTCCACCGCCCCCTCCCGTCGATTTTCCTGTCCCAGGCCACACTCCACCACCTTGTGTAGAACCAACTCCGATTCCATCCCCACCGCCGTGTGACGAGCATTCACCACCGCATCCTCCTACACCTCACCTTCCGCCACCATCTCCATTTCCCCGACCACCACCAGAATATACGTCTCCACCTCCCCCTGTCCGATACAGCTCCCCCAGACCTCCTCCGCCTATTCGATACGGTTTCTCACCACCACCTTCTCCTGTATACAAAGGGCCTATGCCACCTATTGTTGGGGTCCCATACGCGTCCCCTCCCCCACCACCCTTCTATTGA 2442 0.5254 MKKNIFSIPLCHSQLLLLPFFLATLSLSASLHLHITTNAAPTHSPSQRQLLYYRDQFGDRGELVTVDPSFVFENDRIRNAYIALQAWKEAIHSDPRNFTANWVGPNVCNYTAVYCAPAPDNPRIRTVAGIDLNHGDIAGYLPRELGLLADLALFHVNSNRFCGTIPHEFRKLKLLFELDLSNNRFAGKFPEVVLSLPSLKFLDLRYNEFEGTVPNELFDKDLDAIFINNNRFAFDLPDNFGNSPVSVIVLANNRFHGCIPASLGNMSNLNEIILMNNAFRSCLPSEIGRLKNLTVFDVSINQLLGPLPDTIGGMVSLEQLNVAHNLLSGKIPAGICMLPNLQNFTYSYNFFTGEPPACLALPAFDDRRNCLPARPLQRSAAQCMAFLSRPVDCNSFKCKPFGPSPSPGVVPSPPSQSSPPSPPGVPSPPSPSSPAPSPGVGHSPPSPSSGVVPSPPSQGSPPPSPEVVPSPPEISPSPPGVSPSPPVYSPPSPSNPTPPFSSSPPSSPAYSPPSPSSPTPPSSSSPPSSPVYSPPSPSSPTPPSSSSPPSSPVYSPPSPSSPTPPSSSSPPSSPVYSPPSPSSPTPPFSSSPPSSPVYSPPSPSSPTPVYSLPPPPPPSYSSSTPSPPPPGYSLPPPSPPSSSPPSYSPPQPPNPTPPYYVWSPPPSPPNSPSTTPPYYHNTPPLPQHSPPPGNSPSPPIYPYLSPPPPPPVDFPVPGHTPPPCVEPTPIPSPPPCDEHSPPHPPTPHLPPPSPFPRPPPEYTSPPPPVRYSSPRPPPPIRYGFSPPPSPVYKGPMPPIVGVPYASPPPPPFY 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3798g00016 813 FunFam Leucine-rich repeat extensin-like protein 5 243 382 - -
Pral3798g00016 813 Gene3D Ribonuclease Inhibitor 81 240 IPR032675 -
Pral3798g00016 813 PRINTS Proline rich extensin signature 412 424 - -
Pral3798g00016 813 PRINTS Proline rich extensin signature 453 465 - -
Pral3798g00016 813 PRINTS Proline rich extensin signature 492 508 - -
Pral3798g00016 813 PRINTS Proline rich extensin signature 431 447 - -
Pral3798g00016 813 PRINTS Proline rich extensin signature 467 488 - -
Pral3798g00016 813 SUPERFAMILY L domain-like 81 362 - -
Pral3798g00016 813 Gene3D Ribonuclease Inhibitor 241 370 IPR032675 -
Pral3798g00016 813 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 20 630 - -
Pral3798g00016 813 MobiDBLite consensus disorder prediction 404 787 - -
Pral3798g00016 813 FunFam Leucine-rich repeat extensin-like protein 1 81 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3798g00016 Pral-Chr3798 92517 96452 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3798g00016 33 398 Leucine-rich Repeat extension Gene Families AT3G24480 75.472 0.0 614
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3798g00016 - - qsa:O6P43_004046 647.891