Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3796g00008 ATGATATTTTCCTTTTACAAACCTTTGACTGATTTCCTAACTTTCCCACCAGATCCCATGAAAATATTTGCTCTTCAATTATATATACACACACAAACATCATCGATCGAGCTATTATCAAACAGAATTGGAACATTTCATTTTTTTTTTCAATTGAGAATCATTGGAGAAATATTCGTCATGATGTTTTCTCATCATCATCATCACTTTCTTGCACGCTTCTTTCTGATGTGTCTGGGCTTATTGGGATCAGAATTAGCAAATGCACAGTATTATCAGAAAATTGGAGGGAAACTTGTCGCTTACTGGAAGATCACTGTCGACCCCGCCGGTGCCGGCAACTTCACCAACATCCAAGAAGCCATAAACTCAGTCCCTTCCAACAACAACAACTGGGTTTCCATCAATATAAAGGCAGGCATCTATAGGGAAAAAGTGAGGATTCCTGATGACAAGCCGTATATAGTATTGAAAGGCGCAGGGAAGAGGAGAACTATTGTTGTTTGGGATGATCATGAAACAGTGGCACAGAGTCCTACCTTCACCTTGCTGGCTGATAATGTTGTCGTCAAATGTTTGAGCTTTCGGAATTCATACAATAATCCAATTAACGGCAAACCGAGGAAACCGGCGGTGGCGGCAATGGTAGCTGGCGACAAGGCTTTCTTCCTCCGAGTAGGTTTCTATGGTTTACAAGACACATTGTGGGATGATCAAGGACGACATTACTACAAACTTTGCACCATTCAAGGTGCCGTTGATTTTATTTTTGGTGCAGGCCAATCTATATTTGAGAGATGTTCAATATCAGTGATAGCTGGAGCCTTAGATGGCCTTCCAGGGTTTATAACAGCGCAAGGAAGAACAAATCCAAATGATGCAAATGGGTTTGTGTTTAAACATTGTCATGTGTTTGGGAATGGCACAACATATTTGGGAAGGCCTTGGAGAAGTTATTCAAGAGTCCTCTTCTACAAAACCAATATGTCTCAAGTTGTGGAACCTAAGGGTTGGCAGCCGTGGAATTTTGCTACTAATGTGAATCGGGTAACATTTGCAGAGTATGATTGCTTTGGGCCTGGGTCCAACACATCCCAAAGAGTGAGCTGGTCCAAGAACAAGCTTGATTCACTATATGTCGATCAAATGGCTAATATGAGTTTTATTGATTCTGAAGGATGGCTTCAGAATCAACTTTTCTAA 1203 0.4098 MIFSFYKPLTDFLTFPPDPMKIFALQLYIHTQTSSIELLSNRIGTFHFFFQLRIIGEIFVMMFSHHHHHFLARFFLMCLGLLGSELANAQYYQKIGGKLVAYWKITVDPAGAGNFTNIQEAINSVPSNNNNWVSINIKAGIYREKVRIPDDKPYIVLKGAGKRRTIVVWDDHETVAQSPTFTLLADNVVVKCLSFRNSYNNPINGKPRKPAVAAMVAGDKAFFLRVGFYGLQDTLWDDQGRHYYKLCTIQGAVDFIFGAGQSIFERCSISVIAGALDGLPGFITAQGRTNPNDANGFVFKHCHVFGNGTTYLGRPWRSYSRVLFYKTNMSQVVEPKGWQPWNFATNVNRVTFAEYDCFGPGSNTSQRVSWSKNKLDSLYVDQMANMSFIDSEGWLQNQLF 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3796g00008 400 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 104 396 - -
Pral3796g00008 400 Pfam Pectinesterase 105 390 IPR000070 GO:0030599|GO:0042545
Pral3796g00008 400 SUPERFAMILY Pectin lyase-like 104 396 IPR011050 -
Pral3796g00008 400 Gene3D - 102 400 IPR012334 -
Pral3796g00008 400 FunFam Pectinesterase 100 399 - -
Pral3796g00008 400 ProSitePatterns Pectinesterase signature 2. 249 258 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3796g00008 Pral-Chr3796 320371 325034 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3796g00008 68 342 Carbohydrate Esterase AT2G19150 43.682 1.08e-78 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3796g00008 - - qsa:O6P43_026793 463.381