Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3790g00040 ATGGCAAGGCCAAGAATTCGTCTTCGAATTCCAAGTCCCTTGATTCATCGGAAGCTATGGAGATTTCTGGGTTTGTTTTCAAGCCTTGTTGGTCTTATCTGTTACGCTTTGAGTTCCTCTTTCCGCCAACTATTTGGTGAATGGAACTCTTTCAAGCTCATAATCTACTGCGTGGTAAGTTTATGCATAACGAGCTTATTCTTATTTTCTCAGAAACTGAGACTCTCAAGGAGTTTCTTGCTCAAAGTTCATTTGGGTTTCTTGGTTCTGATGATCACAACATTTTACTCATTCTTCTCCGATAAATCAGTCAGGGGAAAACCGGACATATTCAGCTTGATCTCTTGTGCTTCCTTTTCTTTAATGTCCTTAAGCTTATCAAAGCACACCAACCTCGGATTCGAAGGTGATCTTCTCACTTTCTTCCTAGGTTGTCTCACCGTTCAACTCATGAAAGTTCACTTGATGCTTGGCTTCCTAGCTGCCATTTTCTGCTATTTCATCATTGTTCTTCGTTCTCGTCCTTGTCCTAATCAGTCACAAATAGAAGCCACTCAAGCTCAAGATCACCAATCTGTGTCACAAATAGAAATGGAAATTGATTCTGTGAGAGAAATTGATGATACTGGCAATGGTCCTCAATCACAGATATTACAAACAATGTCTGGTGATGAGTACAATTGGAAGAAATATGAAGTAAAACAAGTGAAAGGAAGTGAAAAGCAAATGAGTTTCTACAAATGCTCAATTCCAAAGTGCCCAGTAAAGAAGAGAGTGGAGAGTTATGTAAATGGACAGATCTGTGATGTGGTTTATAAGGGTACTCATAACCATGGTAAGCCTATTACAAAGGAGAGAAACTCATCTTTTGAAACTCTTTATGCAACTAATGCAAGTAACCAACCTTTCAAAGCTTTTTTCTTTGATAGAACCCCTTATCAACCATTGCAGAATCATGAGAACGAACAACTCGACCCGACCGACTCATCCGAGAGTTCATCAGTATCAGTGTGA 1014 0.3945 MARPRIRLRIPSPLIHRKLWRFLGLFSSLVGLICYALSSSFRQLFGEWNSFKLIIYCVVSLCITSLFLFSQKLRLSRSFLLKVHLGFLVLMITTFYSFFSDKSVRGKPDIFSLISCASFSLMSLSLSKHTNLGFEGDLLTFFLGCLTVQLMKVHLMLGFLAAIFCYFIIVLRSRPCPNQSQIEATQAQDHQSVSQIEMEIDSVREIDDTGNGPQSQILQTMSGDEYNWKKYEVKQVKGSEKQMSFYKCSIPKCPVKKRVESYVNGQICDVVYKGTHNHGKPITKERNSSFETLYATNASNQPFKAFFFDRTPYQPLQNHENEQLDPTDSSESSSVSV 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3790g00040 337 SUPERFAMILY WRKY DNA-binding domain 220 281 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral3790g00040 337 Gene3D WRKY domain 212 282 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral3790g00040 337 ProSiteProfiles WRKY domain profile. 217 281 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral3790g00040 337 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 185 325 IPR044810 GO:0003700
Pral3790g00040 337 Pfam WRKY DNA -binding domain 224 278 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral3790g00040 337 MobiDBLite consensus disorder prediction 316 337 - -
Pral3790g00040 337 SMART WRKY_cls 222 280 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3790g00040 Pral-Chr3790 713111 714193 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3790g00040 214 321 WRKY Transcription Factor Family AT5G07100 44.144 2.44e-21 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral3790g00040 WRKY 7.8e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3790g00040 - - pcin:129302720 437.187