Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3790g00024 ATGGTAGGCTCTTCTCCTTGTGCTTCCTGCAAATTGCTACGACGTCGCTGCACCAAGGAATGCATTTTTGCTCCTTACTTTCCTTCTGATGATCCCCAAAAGTTTGCCATCGTCCACAAGGTGTTTGGCGCCAGCAATGTCAGCAAAATGTTGCAGGACCTTCCGGTGCATCAAAGAGCAGATGCCGTGAGCAGTCTGGTTTACGAGGCAAATGCGAGAGTGAGAGATCCAGTGTACGGCTGTGTAGGAGCAATATCATATTTACAAGGTCAAGTTTCACAGTTAAAAATGCAGCTTGCGATGGCTCAAACAGAGATTATGTGCATCCAAATGCAGCAAGATTATCCTTCTTCAAATCTATCACCAGCCCACCAGATTGATCCTTACCAAGACGACAAGTCCCTTATCGTATCATCTGATAATAACTACGAAAGCAATAATAATAATATTCATCAACATCATCAGTATCTCAGTTTTGCTTCTTCTTCTTCCTCTTCTAGTAATGTAATCCAAGACCCTTTTAAGAGAGAGTCATCATTTTGGAGTTAG 549 0.4262 MVGSSPCASCKLLRRRCTKECIFAPYFPSDDPQKFAIVHKVFGASNVSKMLQDLPVHQRADAVSSLVYEANARVRDPVYGCVGAISYLQGQVSQLKMQLAMAQTEIMCIQMQQDYPSSNLSPAHQIDPYQDDKSLIVSSDNNYESNNNNIHQHHQYLSFASSSSSSSNVIQDPFKRESSFWS 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3790g00024 182 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Pral3790g00024 182 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 147 - -
Pral3790g00024 182 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3790g00024 Pral-Chr3790 517296 518724 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3790g00024 3 182 AS2 family AT2G30130 63.212 5.96e-72 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral3790g00024 LOB 2.6e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3790g00024 - - pcin:129314068 253.447