Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3790g00012 ATGCCCTCCTCTCCTGAAGATGCTAATGTTCCTTCTTCTCGCGGTACTTCCTTATTCAAAACTTGTTTCCATGGCGTCAATGGCATTTCAGGGATTGGGATAGTCTCTATACCATATGCACTAGCATCAGGAGGATGGCTAAGCTTAATACTTCTGTTCATCATAGCCATCGCAGCATATTACACAGGAATCTTGATAAAGAGATGCATGGACGAAGATCCCTCCATAGAATCTCTTCCCGACATAGGACAACGTGCGTTTGGGGAGAAAGGAAGGTTGATGGTGAACATAGCCATGAACTGTGAACTGTATCTGGTAGTGACAGGTTACCTTATTCTGGAAGGAGACAACCTCAACAAACTGATAACACATGTACATGTGGACATAGGAGGGATAAGGATTAATGGAATGCAATGTTTTGTGATTCTTACGGCTCTTATTATTTTGCCCACTGTTTGGCTACAAGATTTGAGCCTTCTTTCTTATGTGTCTGCCACTGGGGCGTTGGCTTCTACCATATTCCTCTGTGCTTTGTTGTGCAACGGTGCGTTTGATGGGACTGGGTTTCATCGTAAAGGCATTCTCATTAACTGGAAAGGTCTTCCTGCTGCTGTTAGTTTGTATGCTTTTTGTTACAGTGCTCATCCAGTTTTTCCTAATCTTTACACTTCTATGAAGAACAAACATCAATTTTCCAATGTGCTGCTGGTGTGCTTCACACTTTGCACCTTAATATACGCAGCAATAGCAATTCTGGGTTACTTGATGTTTGGCTCAGAAGTTCTGTCAGAAGTAACCTTAAACCTTCCAAAAGGCAAAATAAGTTCAAAGGTGGCAATTTATACAACGTTGGTGAATCCCATAACAAAGTATGCTTTGATGCTCACACCAATTGTGGACGCCATTAAAAACACAATCCCTTCAAGCTTAAGCAAGAAGAAAGCATCACATTTAGTCCTCAGCACCACCTTGCTGCTCAGCACGGTGATCGTCGCGCTCGCCGTGCCGTTCTTCGGATATTTGATGTCTCTGGTCGGAGCTTTGTTGAGTGTGTCTGCTTCATTTCTGGTCCCGTGTGTGTGTTACTTGAAGATTTCAGGAAAGTTTAAGGTGGTTGGATGGGATATGATGGTCAATTATGGAATTGTTGTCATGGGGATTTCAATTGCAGCTGTGGGAACTTACACTTCACTAGGAGAAATAATCAAACATTTGAAAGTGTAA 1224 0.4248 MPSSPEDANVPSSRGTSLFKTCFHGVNGISGIGIVSIPYALASGGWLSLILLFIIAIAAYYTGILIKRCMDEDPSIESLPDIGQRAFGEKGRLMVNIAMNCELYLVVTGYLILEGDNLNKLITHVHVDIGGIRINGMQCFVILTALIILPTVWLQDLSLLSYVSATGALASTIFLCALLCNGAFDGTGFHRKGILINWKGLPAAVSLYAFCYSAHPVFPNLYTSMKNKHQFSNVLLVCFTLCTLIYAAIAILGYLMFGSEVLSEVTLNLPKGKISSKVAIYTTLVNPITKYALMLTPIVDAIKNTIPSSLSKKKASHLVLSTTLLLSTVIVALAVPFFGYLMSLVGALLSVSASFLVPCVCYLKISGKFKVVGWDMMVNYGIVVMGISIAAVGTYTSLGEIIKHLKV 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3790g00012 407 PANTHER OS05G0424000 PROTEIN-RELATED 23 393 - -
Pral3790g00012 407 Pfam Transmembrane amino acid transporter protein 15 396 IPR013057 -
Pral3790g00012 407 Gene3D Amino acid/polyamine transporter I 12 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3790g00012 Pral-Chr3790 274497 277318 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3790g00012 1 402 Amino Acid or Auxin Permease AAAP Family AT3G28960 55.473 1.40e-164 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3790g00012 K15015 - gmx:100804353 502.671