Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3790g00004 ATGGCTTCTTGGGTTCGAGGTCGGTGTTTAGGTATGGGCTCGTTTGGTACTGTGACTATGGGAGTGAGTAAAGCCGACGGTCGGGTTTTTGCGGTGAAGTCAGTGGATCCTCAGTCGGGTCAGGTGGCGGCCTTGGAGAACGAGATTCGGATCCTGCGGAGCATGTCGTCGCCGTACGTGGTGAGCTTCTTCGGCGACGACGCTACGACGTCGTATCGGAACTTGTATTTGGAGTACCTGCCAGGTGGCACCCTCGCTGACCTAGCGTCTCCGAAGAAGAATCATGGAGATAGATGTGCTGACGTGGACGAGCGCGTGGTGCGGTACTTCACCTGGTGTGTGGTGAACGCGCTGAGGTACGTCCACGCTAAGGGCGTCGTCCACTGTGACGTTAAAGGGAGGAACGTTCTGGTCGGGCACAATGGCGGCGTGGCCAAGCTCGCCGACTTCGGCTCGGCGGTGGAGCAGTGTTCTTCCGGTGCGGTGGCGGTGGGGGTATTGCCACGTGGAAGCCCGCTGTGGATGGCTCCAGAGGTGATTCGGCGGGAGTCTCAGGGACCGGAATCCGACGTGTGGTCCTTAGGATGCACGGTGATCGAGATGCTCACAGGGAAGCCGGGCTGGGAAGACGACGGCTTTAACACGCTCAATCGAATCGGATACTCCGACGAGTTGCCGGAGTTTCCGAGTCAATTGTCAGAACTGGGACGCGACTTCCTCGGCAGGTGCCTGAGGAGAGAACCAAGCGAGCGGTGGAGCTGTGATCAGCTGCTGCAGCATCCATATCTGCTTCCTACTCCTCCCAGTAATCTCTCAGAGTCGTCTCCTCGGTGCATCCTCGATTGGATGAACTCAAACGATTTCAAGGAAGAAGACGAAGAAGAAATCAGAATAAAAAACGAAGACTCAGCGAATGAGAGAATCGGTAAATTAGCTTCAAACTCAAGGGCAAATTGGGAATCCGAAGATGATTGGTTGGAGGTGAGGGCATTGGTGTCCGACACAGAACCAACAGTAGCAGGCAATGTTGCTTCAACAGTTACTGGTAGTGGTAGGGAACGCGAAGAAGAAGAAGGGACGAGTTGGGAATATGGTGATTTGAGGAGGGTAGAAGAGGGAATAGAATTAGGGATAAGCCGGGAATATTTGAAAATAGGGAGGGCAAATTTGGGGATATGGAATTGGGTGGAGGATGACAGTGAAAATGATTGGAGATATGGGTATGGGCGGCACAAGGCGGTAAGCATGTAA 1251 0.5404 MASWVRGRCLGMGSFGTVTMGVSKADGRVFAVKSVDPQSGQVAALENEIRILRSMSSPYVVSFFGDDATTSYRNLYLEYLPGGTLADLASPKKNHGDRCADVDERVVRYFTWCVVNALRYVHAKGVVHCDVKGRNVLVGHNGGVAKLADFGSAVEQCSSGAVAVGVLPRGSPLWMAPEVIRRESQGPESDVWSLGCTVIEMLTGKPGWEDDGFNTLNRIGYSDELPEFPSQLSELGRDFLGRCLRREPSERWSCDQLLQHPYLLPTPPSNLSESSPRCILDWMNSNDFKEEDEEEIRIKNEDSANERIGKLASNSRANWESEDDWLEVRALVSDTEPTVAGNVASTVTGSGREREEEEGTSWEYGDLRRVEEGIELGISREYLKIGRANLGIWNWVEDDSENDWRYGYGRHKAVSM 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3790g00004 416 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 4 333 - -
Pral3790g00004 416 Gene3D Transferase(Phosphotransferase) domain 1 2 330 - -
Pral3790g00004 416 SMART serkin_6 4 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3790g00004 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Pral3790g00004 416 ProSiteProfiles Protein kinase domain profile. 4 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3790g00004 416 Pfam Protein kinase domain 6 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3790g00004 416 SUPERFAMILY Protein kinase-like (PK-like) 4 294 IPR011009 -
Pral3790g00004 416 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Pral3790g00004 416 FunFam Serine threonine protein kinase putative 2 312 - -
Pral3790g00004 416 CDD STKc_MAPKKK 3 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3790g00004 Pral-Chr3790 87626 89031 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3790g00004 4 371 MAP Kinase Kinase Kinase AT1G07150 52.520 2.32e-120 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pral3790g00004 Pkinase 1.6e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3790g00004 - - qsa:O6P43_014068 456.062