Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3790g00002 ATGTCGTGCTCCGTTGCCGTTTCTAATTCTCCGGTCTTTTCTCCGTCGTCTTCCCTCTTTTGCAATAAACCCTCAGTAATCTCTTCCTCACCGGAATCCCTTTCTCTCTCTCTGTCTCACCTCAAGCCTTCCACTTCTGTTTCATCTTCTTCTTCTTCGCCTTCTTCCCCTTCCTCGCCTTTCCGCCTCCGCCTCCTCAAGCCTCCTCCTCCCACCGCCCTTTCCAATTCCGCCTCTGTCTCCGCTCCTTCGTCCTCCACCTCGCCTACCGGTACCGTTTTGAAGAGGAAGAGGCCCGCCAGGCTTGATATTCCCGTCTCGTCCCTTACTTTTGGGGTTCCGGCGACGCCTTCTTCTTCGGTGGCTCGAGATGTTCTAGAGGCTGAAGGGCATGGGTTTTCTGTGTATTGTAAGAGAGGCAGGCGAGAGTACATGGAAGATCGTTATTCTGCTGCCGTCAATCTTCAAGGACAACCCAAACAGGCTTTCTTTGGCATATTTGATGGGCATGGAGGTTCAAAAGCTGCTGAATTTGCTGCACAAAACTTAGAAAAGAACGTCATGGATGAAGTGACAAGAAGAGATGAAGATGACATGGAGGAGGCAGTGAAACATGGTTACCTGAACACTGATTCTGATTTCTTGAAAGGGGATCTCCGTGGTGGCTCCTGCTGTGCAACAGCACTGATTAGAAATGGGAACCTTGTTGTTTCCAACGCCGGTGATTGCCGTGCTGTTATTAGCCGTGGTGGCGTTGCAGAAGCCCTCACATCTGATCACAGACCTTCAAGGGAAGATGAAAAGGACAGAATTGAGACCACAGGTGGCTATGTTGATTTCTGCCGTGGGGTTTGGAGGATCCAGGGATCCCTGGCCGTTTCTAGAGGAATTGGAGATCGGTATTTGAAGCAGTGGGTGATAGCTGAACCTGAGACAAAAGTTCTCAGGATTGAACCTGAACATGACTTGTTGATATTAGCTTCAGATGGATTATGGGATAAGGTTACTAATCAAGAAGCTGTGGATATTGCTCGTCCTCTTTGCAACGGGGCTAGTAATATGGCACAACCATTGATGGCCTGTAAAAGGCTCGTAGATTTGTCTGTTTCACGAGGCTCAAGTGATGACATAAGTGTTATGCTTGTAAAACTGGGACAATTTATTTAA 1167 0.4841 MSCSVAVSNSPVFSPSSSLFCNKPSVISSSPESLSLSLSHLKPSTSVSSSSSSPSSPSSPFRLRLLKPPPPTALSNSASVSAPSSSTSPTGTVLKRKRPARLDIPVSSLTFGVPATPSSSVARDVLEAEGHGFSVYCKRGRREYMEDRYSAAVNLQGQPKQAFFGIFDGHGGSKAAEFAAQNLEKNVMDEVTRRDEDDMEEAVKHGYLNTDSDFLKGDLRGGSCCATALIRNGNLVVSNAGDCRAVISRGGVAEALTSDHRPSREDEKDRIETTGGYVDFCRGVWRIQGSLAVSRGIGDRYLKQWVIAEPETKVLRIEPEHDLLILASDGLWDKVTNQEAVDIARPLCNGASNMAQPLMACKRLVDLSVSRGSSDDISVMLVKLGQFI 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3790g00002 388 FunFam probable protein phosphatase 2C 25 125 387 - -
Pral3790g00002 388 Gene3D - 124 387 IPR036457 -
Pral3790g00002 388 ProSitePatterns PPM-type phosphatase domain signature. 163 171 IPR000222 GO:0043169
Pral3790g00002 388 ProSiteProfiles PPM-type phosphatase domain profile. 132 384 IPR001932 -
Pral3790g00002 388 SMART PP2C_SIG_2 140 384 IPR001932 -
Pral3790g00002 388 MobiDBLite consensus disorder prediction 36 60 - -
Pral3790g00002 388 Pfam Protein phosphatase 2C 134 377 IPR001932 -
Pral3790g00002 388 SMART PP2C_4 125 382 IPR001932 -
Pral3790g00002 388 MobiDBLite consensus disorder prediction 72 93 - -
Pral3790g00002 388 MobiDBLite consensus disorder prediction 36 99 - -
Pral3790g00002 388 CDD PP2Cc 132 384 IPR001932 -
Pral3790g00002 388 SUPERFAMILY PP2C-like 129 385 IPR036457 -
Pral3790g00002 388 PANTHER PROTEIN PHOSPHATASE 2C 64 383 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3790g00002 Pral-Chr3790 37089 39448 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3790g00002 1 388 PP2C-type Phosphatase Gene Family AT2G30020 66.917 8.41e-177 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3790g00002 K17506 - gmx:100797934 536.184