Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3788g00003 ATGGAGGATAAGGCAGGAGAAAAAAATGAATTACAGCATGCACCGTCTTCAGTTGTGGCTGTAGGTATCAAGGGTGGCAAGAAAAGTACAACTATATTACAGTGGGCACTTAAGAGGTTTGTGCCGGAAGGGAGGATCATGTTTAAGCTGATACATGTCCATGCCAGTATAAAACGAATACCAACACCAATGGGAAATTTCATCCCTATTTCACAAGTGCGTCCTGATGTAGTGAATGCCTTCAGAAAGGAAGTTGAGTGGCAGAAAAGTCAAATGCTTCTACCCTATAAAAATATGTGTGATCAGGAAAAGGTATATGTAGATACAGTGGTGATAGAATCTGATGATGTTGCAGCTGCAATAGCAGAAGAAATTGCTAAGGGTGCCGTGACCAAACTTATTATTGGTGCATCATCTCGTAGCATATTTTCCAGCAAGCTTAAGGGTATTGCTGCAAAAATATCAGTTTGTACTCCAAGATTTTGTACAGTTTATGCTATTTCCAAAGGAAAATTGTCTTCTGTACGGCCGTCAGATGTACAAATTGATCAGAGCTTTGCAGACGATGGTAGTGAAACCAATGGTTCTACCAGTTCTTCAAACTGCACTTCCTCCTCTCCCCCGGACTCTGCCACAGTTGCTTTATATGGTCCTTTAAACTCCTCTTCAACAGAACAGCAATTTGAAGCTCTTTCCTCTGTTAATCAGACTGTCCTAAGTGCAAATCCTAGTTTTATTGAATCTAGCCATTGTGGATGTCAGTCCCTAGATACTGGAACAGAGAATAATGTTACAATTTCGTCTGCTAGAAATTATAGTATTGGCTATGGTCTTAGTCAGGCTTCAAGTTGCATAAGCTTTAAATCAGAAACAGAATCGCAGGTCCATGTTCAAAATTCCACCCTTGATGTGCTACCAGCAACTGAATCTCCTTCACCTGCTAGGCAGGAAAATATTAACCTTGAGCTGGAAAAGTTGAGGATTGAATTAAGACATGCACAAGGAATGCATGCAATAGCTCAAAATGAGAACATTGATGCATCACGGAAGCTGAATGATTTAAATAAGAGACGATCAGATGAATTAATGAAGCTCAATGAGATTATTGCTAAGGAAGAGTCGGCAAATGAATCATTAAGGCAAGAGAGAGAGAAATATGAAGCTGCAAAGAGAGAAACTGATTATTTGAAAGAATGTGCTGAGAGAGAAACTGCAGAAAGGAGAGAAATGGAGATGAAAGCTATTCGTGCTGCGCAAGAGAAAGAAAAACTAGAGTCTGCTCTTACTGGTTTGACCCCTCAGTACCATAAGTTTACATGGGACGAAATAGTGTCTGCTACCTCATCTTTCTCTGAAGATCTGAGAATCGGAATGGGAGCATATGGTACAGTGTACAAGTGTAACTTGCATCATACTGTTGTAGCTGTTAAAGTACTCCACTCTAAAGGGAGCCACAAAATCAAGCAATTCCAACGGGAGCTCGAAATCTTGTCCAGAGTTCGTCATCCTAATTTGCTGCTCCTTCTTGGTGCATGTCCTGATGATGGATGCCTTGTATATGAATATATGGAGAATGGTAGCTTGGAGGACCGGTTACTCAAGAAAAATGGTACGGCCCCACTTCCTTGGTATGAGAGATACCGGATTGCATGGGAAGTAGCCTCAGCTCTTGCCTTTCTTCACAGCTCAAAGCCAACACCCATCATCCACCGTGATTTAAAACCAGCAAACATTTTGCTTGACAGTAACTTAATGAGCAAGATTGGTGATATTGGTCTTTCTACTGTGCTCAATTCGGATGGCTCCTCCACCATGCACAAGGACACAGAGCCTGTGGGGACCCTTTGCTATATTGATCCTGAGTATCAACGAACTGGGTTGTTATCTCCAAAATCCGATGTATATGCTTTTGGAATGGTGATCTTACAATTATTGACAGCAAAACCGGCTATAGCACTCACTCATGTGGTAGAAACAGCAGTTGATGATGGAAAGCTCACAGATATATTGGACCCGGAGGCAGGAAGTTGGCCACTTCAGGAGACAATGGACTTGGCTCGATTAGGCCTTAGCTGTACAGAACTCCGTCGTAGAGACAGACCCAATTTAGATCACGTGATTCCTGCACTGGAAAGATTGAAAGAAGCTGCTGACAAAGCCCAAAGTTCCAGTCTTAATGTTAAATCAAAACCTCCTAATCATTTTATTTGCCCAATACTCCAGGTAGTTAAAAAATTCAATACTGACAATATTTGA 2256 0.4145 MEDKAGEKNELQHAPSSVVAVGIKGGKKSTTILQWALKRFVPEGRIMFKLIHVHASIKRIPTPMGNFIPISQVRPDVVNAFRKEVEWQKSQMLLPYKNMCDQEKVYVDTVVIESDDVAAAIAEEIAKGAVTKLIIGASSRSIFSSKLKGIAAKISVCTPRFCTVYAISKGKLSSVRPSDVQIDQSFADDGSETNGSTSSSNCTSSSPPDSATVALYGPLNSSSTEQQFEALSSVNQTVLSANPSFIESSHCGCQSLDTGTENNVTISSARNYSIGYGLSQASSCISFKSETESQVHVQNSTLDVLPATESPSPARQENINLELEKLRIELRHAQGMHAIAQNENIDASRKLNDLNKRRSDELMKLNEIIAKEESANESLRQEREKYEAAKRETDYLKECAERETAERREMEMKAIRAAQEKEKLESALTGLTPQYHKFTWDEIVSATSSFSEDLRIGMGAYGTVYKCNLHHTVVAVKVLHSKGSHKIKQFQRELEILSRVRHPNLLLLLGACPDDGCLVYEYMENGSLEDRLLKKNGTAPLPWYERYRIAWEVASALAFLHSSKPTPIIHRDLKPANILLDSNLMSKIGDIGLSTVLNSDGSSTMHKDTEPVGTLCYIDPEYQRTGLLSPKSDVYAFGMVILQLLTAKPAIALTHVVETAVDDGKLTDILDPEAGSWPLQETMDLARLGLSCTELRRRDRPNLDHVIPALERLKEAADKAQSSSLNVKSKPPNHFICPILQVVKKFNTDNI 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3788g00003 751 CDD STK_N 18 170 - -
Pral3788g00003 751 Coils Coil 316 357 - -
Pral3788g00003 751 Gene3D Phosphorylase Kinase; domain 1 429 522 - -
Pral3788g00003 751 Coils Coil 362 392 - -
Pral3788g00003 751 SUPERFAMILY Protein kinase-like (PK-like) 431 710 IPR011009 -
Pral3788g00003 751 PANTHER OS02G0152300 PROTEIN 18 723 - -
Pral3788g00003 751 MobiDBLite consensus disorder prediction 185 216 - -
Pral3788g00003 751 Pfam Protein kinase domain 453 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3788g00003 751 Coils Coil 400 427 - -
Pral3788g00003 751 ProSiteProfiles Protein kinase domain profile. 450 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3788g00003 751 SMART serkin_6 450 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3788g00003 751 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 20 148 - -
Pral3788g00003 751 ProSitePatterns Protein kinases ATP-binding region signature. 456 477 IPR017441 GO:0005524
Pral3788g00003 751 CDD STKc_IRAK 456 713 - -
Pral3788g00003 751 Gene3D HUPs 11 150 IPR014729 -
Pral3788g00003 751 ProSitePatterns Serine/Threonine protein kinases active-site signature. 568 580 IPR008271 GO:0004672|GO:0006468
Pral3788g00003 751 Gene3D Transferase(Phosphotransferase) domain 1 523 732 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3788g00003 Pral-Chr3788 58785 65981 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3788g00003 16 743 U-box Gene Family AT4G25160 51.235 0.0 738
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pral3788g00003 Pkinase 1.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3788g00003 - - gsj:114409387 992.26