Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3782g00003 ATGGCGAAAACTCCCGATTATTCCGACCCACTTAGATGGGGGGAGGCAGCAGAGTCGCTCAAGGGAAGCCACTTGGAGGAAGTAAGAGCCATGGCGACTGACTACTGGAGGGCCGTCGTCCATTTGGGCGGCGCGAGGCTGTCGCTTTCCCAGGTGGCCGCGGCGGCTAATCGGGGCTCCGACGTGAAGGTGGTTTTATCGGAGTTAGCAAGGGCCGGCGTGAAGGCGAGCAGTGATTGGATAGTGAAAAGTGTTAAGAATGGGACTCCCATTTACGGTGTCACCACTGGCTTTGGCGCTGCTTCTCATAAGCAAACTGAACAAGTCGCTGCTCTTCAAAAGGAGCTTGTAAGATTCTTAAACTGTGCGATATTCGACAAGGGAAAAGGGACAAGGCACACTCTACCTGTGCCAGCAAGCAGAGCAGCAATGGTTGTGAGAGTGAACACTCTGCTTCAAGGCTTCTCAGGCATTCGATTTGAGATGTTAGAAGCGATCACCAAACTGCTCAACCACAACATCACTCCTTGCTTGCCTCTCCGTGGCACCATCACTGCTTCCGGCGATCTCATCCCTCTTTCCTACATTCTCGCTTTGCTTGTTGGTCGCCCAAATTCACAAGCCATTGGGCCTTCCGGAGAGTTCCTTACTCCCAACCAAGCTTTCCTTCAAGCTGGCATCAATAATACAGGCGATGAGAGAGATATAGACAATGGTGGGTCCCACATGGATATTGTGAAGTTCTTTGAATTGCAGCCCAAGGAAGGCCTTGCTCTTGTGAATGGCACAGCTGTTGGATCTGGATTGGCTTCCATAGTGCTTTTTGAAGCAAATATTTTAGCATTATTGTCAGAAGTCACATCCGCCATTTTTGCTGAAGTAATGCATGGGAAGCCAGAATTCACTCATCATCTGATTCACAATCTTAAACACCATCCTGGTCAGATTGAAGCTGCTGCAATTATGGAACACATTTTAGATGGTAGCTCTTATGTGAAGCAATCTCTGAAATCCCAAAAGCCCAGGAAAGAACGATATGCTCTTATAACCTCTCCTCAATGGTTAGGACCACAGATTGAAGTCATCAGATATAGCACCAAGTCCATTGAAAGGGAGATAAACTCTGTTAACGACAATCCTTTGATCGACATTTCAAGTAACAAGGCTTTCCATGGTGGTAATTTCCAAGGCACACCCATTGGAGTTTCAATGGACAACACGCGTTTAGCTGTTGCTTCCATAGGCAAACTTGTGTTTGCACAGTTCACTGAGCTGGTAAACGACATGTATAACAATGGGTTGCCATCGAATCTCTCTGCTTCTAGAAACCCAAGCTTAGATTATGGTTTTAAGGCATGTGAAGTTGCAATGGCGTCTTATTGTTCTGAACTTCAATTTTTGGCAAATCCAGTGACGAGTCACGTTCAAAGTGCAGAACATCACAACCAAGATGTGAACTCTCTGGGTTTGATTTCTGCAAGAAAAACTAGTGAGGCTATTGAGATCTTGAAGCTCATGTGCTCAACTTATTTGGCAGCACTATGTCAAGCCATTGACCTGAGGCACTTGGAAGAAATCTTCATTATCACTGTGAAAAACACTATAAGCCAAGTTACAAATAAGATAGTTCCTTCTACAGAGGACCTATTTGATCGACTTTGTGAAGAAGATTTACTCAAAGTGGTTGATAATGAATATGTGTTTTCATACATTGATGATCCCTTCAATGTTGCATACCCACTGATGCCGAAACTGAAACAAGTTCTTTATGAGAAAGCACATAAGAACGTTGTGAAAGGGAAGATGAATAATGTGAACAGTGCTTCAGTTTTTGAGAAGATTGATGAGTTTGAAGATGAACTTAAGCGTGTTTTGCCAAAGGAAGTTGAAAGGGCAAGGGTGGGTTATGAGAATGGTGAGCCAGCAATTCCAAATAGAATTAAGGAGTGCAGGTCATACCCGTTATATAAGTTTGTAAGGGAAGAGTTAAAGACTGGCTTGCTTACAGGAGAAAAGATCAATTCACCAGATGAGGACTTAGATAAAGTGTTTAAAGCAATCTCTGAAGCAAGGATTGTTGACCCACTTTTGGAGTGCCTTGCTGATTGGAATGGTGTTCCAATTTCAACCTAA 2133 0.4426 MAKTPDYSDPLRWGEAAESLKGSHLEEVRAMATDYWRAVVHLGGARLSLSQVAAAANRGSDVKVVLSELARAGVKASSDWIVKSVKNGTPIYGVTTGFGAASHKQTEQVAALQKELVRFLNCAIFDKGKGTRHTLPVPASRAAMVVRVNTLLQGFSGIRFEMLEAITKLLNHNITPCLPLRGTITASGDLIPLSYILALLVGRPNSQAIGPSGEFLTPNQAFLQAGINNTGDERDIDNGGSHMDIVKFFELQPKEGLALVNGTAVGSGLASIVLFEANILALLSEVTSAIFAEVMHGKPEFTHHLIHNLKHHPGQIEAAAIMEHILDGSSYVKQSLKSQKPRKERYALITSPQWLGPQIEVIRYSTKSIEREINSVNDNPLIDISSNKAFHGGNFQGTPIGVSMDNTRLAVASIGKLVFAQFTELVNDMYNNGLPSNLSASRNPSLDYGFKACEVAMASYCSELQFLANPVTSHVQSAEHHNQDVNSLGLISARKTSEAIEILKLMCSTYLAALCQAIDLRHLEEIFIITVKNTISQVTNKIVPSTEDLFDRLCEEDLLKVVDNEYVFSYIDDPFNVAYPLMPKLKQVLYEKAHKNVVKGKMNNVNSASVFEKIDEFEDELKRVLPKEVERARVGYENGEPAIPNRIKECRSYPLYKFVREELKTGLLTGEKINSPDEDLDKVFKAISEARIVDPLLECLADWNGVPIST 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3782g00003 710 CDD PAL-HAL 47 521 IPR001106 -
Pral3782g00003 710 NCBIfam phenylalanine ammonia-lyase 9 700 IPR005922 GO:0005737|GO:0006559|GO:0016841
Pral3782g00003 710 FunFam Phenylalanine ammonia-lyase 1 263 - -
Pral3782g00003 710 Gene3D - 524 645 IPR023144 -
Pral3782g00003 710 Gene3D Fumarase/aspartase (Central domain) 264 705 - -
Pral3782g00003 710 Pfam Aromatic amino acid lyase 47 522 IPR001106 -
Pral3782g00003 710 SUPERFAMILY L-aspartase-like 9 708 IPR008948 GO:0003824
Pral3782g00003 710 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 182 198 IPR022313 GO:0016841
Pral3782g00003 710 Gene3D - 2 263 IPR024083 -
Pral3782g00003 710 PANTHER HISTIDINE AMMONIA-LYASE 9 709 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3782g00003 Pral-Chr3782 131694 138323 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3782g00003 9 708 Monolignol Biosynthesis Gene Families AT2G37040 67.560 0.0 984
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3782g00003 K10775 - gmx:100787872 990.334