Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3782g00002 ATGGCGAAAACTCCCGATTATTCCGACCCACTTAGATGGGGGGAGGCAGCAGAGTCGCTCAAGGGAAGCCACTTGGAGGAAGTAAGAGCCATGGCGACTGACTACTGGAGGGCCGTCGTCCATTTGGGCGGCGCGAGGCTGTCGCTTTCCCAGGTGGCCGCGGCGGCTAATCGGGGCTCCGACGTGAAGGTGGTTTTATCGGAGTTAGCAAGGGCCGGCGTGAAGGCGAGCAGTGATTGGATAGTGAAAAGTGTTAAGAATGGGACTCCCATTTACGGTGTCACCACTGGCTTTGGCGCTGCTTCTCATAAGCAAACTGAACAAGTCGCTGCTCTTCAAAAGGAGCTTGTAAGATTCTTAAACTGTGCGATATTCGACAAGGGAAAAGGGACAAGGCACACTCTACCTGTGCCAGCAAGCAGAGCAGCAATGGTTGTGAGAGTGAACACTCTGCTTCAAGGCTTCTCAGGCATTCGATTTGAGATGTTAGAAGCGATCACCAAACTGCTCAACCACAACATCACTCCTTGCTTGCCTCTCCGTGGCACCATCACTGCTTCCGGCGATCTCATCCCTCTTTCCTACATTCTCGCTTTGCTTGTTGGTCGCCCAAATTCACAAGCCATTGGGCCTTCCGGAGAGTTCCTTACTCCCAACCAAGCTTTCCTTCAAGCTGGCATCAATAATACAGGTATCGATACCAATAAATCATCAGGCGATGAGAGAGATATAGACAATGGTGGGTCCCACATGGATATTGTGAAGTTCTTTGAATTGCAGCCCAAGGAAGGCCTTGCTCTTGTGAATGGCACAGCTGTTGGATCTGGATTGGCTTCCATAGTGCTTTTTGAAGCAAATATTTTAGCATTATTGTCAGAAGTCACATCCGCCATTTTTGCTGAAGTAATGCATGGGAAGCCAGAATTCACTCATCATCTGATTCACAATCTTAAACACCATCCTGGTCAGATTGAAGCTGCTGCAATTATGGAACACATTTTAGATGGTAGCTCTTATGTGAAGCAATCTCTGAAATCCCAAAAGCCCAGGAAAGAACGATATGCTCTTATAACCTCTCCTCAATGGTTAGGACCACAGATTGAAGTCATCAGATATAGCACCAAGTCCATTGAAAGGGAGATAAACTCTGTTAACGACAATCCTTTGATCGACATTTCAAGTAACAAGGCTTTCCATGGTGGTAATTTCCAAGGCACACCCATTGGAGTTTCAATGGACAACACGCGTTTAGCTGTTGCTTCCATAGGCAAACTTGTGTTTGCACAGTTCACTGAGCTGGTAAACGACATGTATAACAATGGGTTGCCATCGAATCTCTCTGCTTCTAGAAACCCAAGCTTAGATTATGGTTTTAAGGCATGTGAAGTTGCAATGGCGTCTTATTGTTCTGAACTTCAATTTTTGGCAAATCCAGTGACGAGTCACGTTCAAAGTGCAGAACATCACAACCAAGATGTGAACTCTCTGGGTTTGATTTCTGCAAGAAAAACTAGTGAGGCTATTGAGATCTTGAAGCTCATGTGCTCAACTTATTTGGCAGCACTATGTCAAGCCATTGACCTGAGGCACTTGGAAGAAATCTTCATTATCACTGTGAAAAACACTATAAGCCAAGTTACAAATAAGATAGTTCCTTCTACAGAGGACCTATTTGATCGACTTTGTGAAGAAGATTTACTCAAAGTGGTTGATAATGAATATGTGTTTTCATACATTGATGATCCCTTCAATGTTGCATACCCACTGATGCCGAAACTGAAACAAGTTCTTTATGAGAAAGCACATAAGAACGTTGTGAAAGGGAAGATGAATAATGTGAACAGTGCTTCAGTTTTTGAGAAGATTGATGAGTTTGAAGATGAACTTAAGCGTGTTTTGCCAAAGGAAGTTGAAAGGGCAAGGGTGGGTTATGAGAATGGTGAGCCAGCAATTCCAAATAGAATTAAGGAGTGCAGGTCATACCCGTTATATAAGTTTGTAAGGGAAGAGTTAAAGACTGGCTTGCTTACAGGAGAAAAGATCAATTCACCAGATGAGGACTTAGATAAAGTGTTTAAAGCAATCTCTGAAGCAAGGATTGTTGACCCACTTTTGGAGTGCCTTGCTGATTGGAATGGTGTTCCAATTTCAACCTAA 2157 0.4414 MAKTPDYSDPLRWGEAAESLKGSHLEEVRAMATDYWRAVVHLGGARLSLSQVAAAANRGSDVKVVLSELARAGVKASSDWIVKSVKNGTPIYGVTTGFGAASHKQTEQVAALQKELVRFLNCAIFDKGKGTRHTLPVPASRAAMVVRVNTLLQGFSGIRFEMLEAITKLLNHNITPCLPLRGTITASGDLIPLSYILALLVGRPNSQAIGPSGEFLTPNQAFLQAGINNTGIDTNKSSGDERDIDNGGSHMDIVKFFELQPKEGLALVNGTAVGSGLASIVLFEANILALLSEVTSAIFAEVMHGKPEFTHHLIHNLKHHPGQIEAAAIMEHILDGSSYVKQSLKSQKPRKERYALITSPQWLGPQIEVIRYSTKSIEREINSVNDNPLIDISSNKAFHGGNFQGTPIGVSMDNTRLAVASIGKLVFAQFTELVNDMYNNGLPSNLSASRNPSLDYGFKACEVAMASYCSELQFLANPVTSHVQSAEHHNQDVNSLGLISARKTSEAIEILKLMCSTYLAALCQAIDLRHLEEIFIITVKNTISQVTNKIVPSTEDLFDRLCEEDLLKVVDNEYVFSYIDDPFNVAYPLMPKLKQVLYEKAHKNVVKGKMNNVNSASVFEKIDEFEDELKRVLPKEVERARVGYENGEPAIPNRIKECRSYPLYKFVREELKTGLLTGEKINSPDEDLDKVFKAISEARIVDPLLECLADWNGVPIST 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3782g00002 718 CDD PAL-HAL 47 529 IPR001106 -
Pral3782g00002 718 NCBIfam phenylalanine ammonia-lyase 9 708 IPR005922 GO:0005737|GO:0006559|GO:0016841
Pral3782g00002 718 FunFam Phenylalanine ammonia-lyase 1 247 - -
Pral3782g00002 718 Gene3D - 532 653 IPR023144 -
Pral3782g00002 718 Gene3D Fumarase/aspartase (Central domain) 272 713 - -
Pral3782g00002 718 Pfam Aromatic amino acid lyase 47 530 IPR001106 -
Pral3782g00002 718 Gene3D - 2 271 IPR024083 -
Pral3782g00002 718 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 182 198 IPR022313 GO:0016841
Pral3782g00002 718 PANTHER HISTIDINE AMMONIA-LYASE 255 717 IPR001106 -
Pral3782g00002 718 SUPERFAMILY L-aspartase-like 9 716 IPR008948 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3782g00002 Pral-Chr3782 131694 138323 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3782g00002 9 716 Monolignol Biosynthesis Gene Families AT2G37040 67.225 0.0 983
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3782g00002 K10775 - gmx:100787872 987.252