Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3781g00018 ATGGAGCAGAAAGGCTTGTTGATCTCAGCGTTAAGTGTTGGTGTGGGAGTTGGGGTGGGCATTGGGTTGGCTTCTGGGCAAAACGTAAGCAAATGGGGAGCTAATACTTGTTCCTCAAACGCCCTTACTGTGGAAAAGATAGAGCAAGAAATGCTTCGATTAGTTGTTGATGGCAGAGAAACCAAAGTCACCTTTAATCAGTTTCCTTATTATCTCAGTGAGCAGACTCGCGTGTTGCTGACAAGTGCTGCTTATGTCCATTTAAAACATGCTGAGGTCTCCAAATTTACACGTAATCTTTCTCCAGCAAGCCGGACGATTCTACTCTCTGGACCAGCAGAACTTTACCAACAGGTGCTTGCCAAAGCTTTAGCTCATTACTTTGAAGCAAAGTTGCTTCTGTTGGATTTAACCGACTTTTCATTGAAGATTCAAAGTAGATATGGTTCTGGCAATAAAGAATCCGCTTTTAAGAGGTCCACTTCAGAGTCAACTTTGGAGAGACTATCTGGCTTACTTGGGTCATTTTCAATCTTTCCACAGAAGGAGGAACCTAAAGGAAAAATCATTAGACAAAGCAGTGGCATGGACCTCAGATCAATGGGAACTGATGGATCTTGCAATCCTCCTCGCATTCGTCGGAATGCTTCTGCCTCTGCAAATATCAGTAGCCTTGCCATGCAGAATGCTCCTTCTAATCCAGGTCCTCTTAGGCGCACAACCAGTTGGTCTTTTGATGAAAAACTTCTTATACAATCTCTTTACAAGGTCCTTAGTTATGTGTCAAAAACTTATCCCATAGTGCTGTATCTGCGGGATGTTGATAAGTTGATAAATAGATCACAAAGGACTTATAAATTGTTACAAAAAATGTTGGAGAAACTCTCTGGACCAGTTCTGATTCTCGGTTCTCGAGTTCTGGATCCTGGTAATGACTACGGTGAGGTAGATGAGAAACTTACTTCAGTCTTTCCCTACAACATCGAAATTAGACCTCCAGGTGATGAATCACATCTTGTCAGCTGGAAGACTCAACTGGAAGAAGACATGAAAAAGATCCAGGTTCAGGATAACAAAAACCATATTTTGGAAGTACTTGCAGCAAATGATCTTGATTGTGACGATCTAGATTCCATCTGTGTGGCAGACACAATGGTTCTTAGTAACTACATAGAAGAGATTGTCGTGTCAGCAATTTCTTATCATTTAATGAAAAACAAAGACCCAGAGTACAGAAATGGCAAACTTGTTCTTTCATGCAACAGTTTATCTCAAGCATTGAGTATATTCCAAGAGGGAAAGTCATATGGAAGAGACACGTTAAAATTGGAAGCTCAAGATGTGAAGTCTGAGAAGGAAAAAGGGGAAGCTGCTGCTGTGAAGCCTGAAGCGAAGTCTGAAAATGCAGCTCCAGAAAAGAAAACTGTAGGAGCAACAACAGCTTCAGTGGCAAAGGCCGAGAATGCAACTTCAGTTCCTCAAGAACCCAAAGTTGCTGAACCTCCTCCAGATAATGAATTTGAGAAACGAATAAGGCCAGAGGTAATAGCAGCAAATGAGATTAATGTGACATTTGATGATATTGGTTCCTTAGAAGAGACCAAAGAATCCCTTCAAGAACTAGTGATGCTTCCACTACGGAGGCCTGACCTTTTCACCGGAGGCCTTCTGAAGCCTTGTAGAGGAATATTGCTGTTTGGTCCACCTGGCACAGGAAAGACAATGCTGGCTAAGGCCATTGCAAGGGAGGCTGGAGCAAGCTTCATCAATGTATCCATGTCTACCATAACTTCCAAATGGTTTGGTGAAGACGAAAAGAATGTTCGAGCTTTGTTCACATTGGCAGCTAAGGTCTCCCCAACTATTATATTTGTTGATGAGGTCGATAGCATGCTTGGCCAACGCACAAGAGTTGGAGAGCATGAAGCCATGAGGAAAATAAAGAATGAATTCATGACTCACTGGGATGGCCTTATGACAAAACCAGATCAGCGCATCCTTGTTCTTGCTGCAACAAATAGGCCCTTTGATCTAGATGAAGCCATTATTAGGAGATTTGAAAGAAGAATTATGGTAGGGCTTCCATCAGCAGAGAACAGGGAGAAGATTTTGAGAACTCTATTGGCAAAAGAAAAGGTAGATGATGAAGTTGACTTCAAGGAATTAGCAACTATGACAGAAGGATATACTGGAAGTGATTTGAAGAACCTTTGCACAACCGCTGCTTACCGGCCTGTCAGAGAGTTAATTCAGAAAGAGAGACTGAAGACTCTGAAGAAGAAGCAGAAAGCTGCATATAAAGATGTACAAGGTAGACAAGGGGAAGAATCAACAGTAGAAAATGCCCCAGATGCTGGGAATGCACAAGAGGAAGTTGAACAGGAAAGAGTTATTGTCCTTCGGCCATTGAACATGGAGGACTTCAGAGAGGCGAAAAATCAGGTTGCGGCAAGCTTTGCATCTGAGGGAGCTGGAATGAATGAGTTGAAGCAGTGGAATGACTTGTATGGTGAAGGTGGTTCGAGGAAGAAACAGCAATTGACTTACTTCCTGTGA 2556 0.4245 MEQKGLLISALSVGVGVGVGIGLASGQNVSKWGANTCSSNALTVEKIEQEMLRLVVDGRETKVTFNQFPYYLSEQTRVLLTSAAYVHLKHAEVSKFTRNLSPASRTILLSGPAELYQQVLAKALAHYFEAKLLLLDLTDFSLKIQSRYGSGNKESAFKRSTSESTLERLSGLLGSFSIFPQKEEPKGKIIRQSSGMDLRSMGTDGSCNPPRIRRNASASANISSLAMQNAPSNPGPLRRTTSWSFDEKLLIQSLYKVLSYVSKTYPIVLYLRDVDKLINRSQRTYKLLQKMLEKLSGPVLILGSRVLDPGNDYGEVDEKLTSVFPYNIEIRPPGDESHLVSWKTQLEEDMKKIQVQDNKNHILEVLAANDLDCDDLDSICVADTMVLSNYIEEIVVSAISYHLMKNKDPEYRNGKLVLSCNSLSQALSIFQEGKSYGRDTLKLEAQDVKSEKEKGEAAAVKPEAKSENAAPEKKTVGATTASVAKAENATSVPQEPKVAEPPPDNEFEKRIRPEVIAANEINVTFDDIGSLEETKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAREAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLMTKPDQRILVLAATNRPFDLDEAIIRRFERRIMVGLPSAENREKILRTLLAKEKVDDEVDFKELATMTEGYTGSDLKNLCTTAAYRPVRELIQKERLKTLKKKQKAAYKDVQGRQGEESTVENAPDAGNAQEEVEQERVIVLRPLNMEDFREAKNQVAASFASEGAGMNELKQWNDLYGEGGSRKKQQLTYFL 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3781g00018 851 SMART AAA_5 559 696 IPR003593 GO:0016887
Pral3781g00018 851 Pfam ATPase family associated with various cellular activities (AAA) 563 693 IPR003959 GO:0005524|GO:0016887
Pral3781g00018 851 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 93 372 IPR027417 -
Pral3781g00018 851 Gene3D - 695 766 - -
Pral3781g00018 851 Coils Coil 438 458 - -
Pral3781g00018 851 MobiDBLite consensus disorder prediction 766 792 - -
Pral3781g00018 851 MobiDBLite consensus disorder prediction 447 470 - -
Pral3781g00018 851 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 522 697 - -
Pral3781g00018 851 MobiDBLite consensus disorder prediction 447 512 - -
Pral3781g00018 851 Gene3D - 522 694 IPR027417 -
Pral3781g00018 851 ProSitePatterns AAA-protein family signature. 666 685 IPR003960 GO:0005524|GO:0016887
Pral3781g00018 851 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 45 850 - -
Pral3781g00018 851 Pfam AAA+ lid domain 717 754 IPR041569 -
Pral3781g00018 851 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 522 762 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3781g00018 Pral-Chr3781 400265 406373 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3781g00018 523 770 Calmodulin-binding Proteins AT3G56690 37.052 1.14e-42 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3781g00018 - - pcin:129311736 1461.43