Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral377g00011 ATGGATTGTGTAGAAATAGAGAGGGGAGACAAGAGAGACTGGTTGGAGATAATGGAGGAGGATGAAGGAATGGAAGGATTGTTGGACACTGTTACTGTACCAGAAAAAGAAAACAGAGATGGACTACATGAAGCTCGACTTAAAGAGGGAGAAGGAAGAGACGTTGGACCCAGGGAAGAAAGAAGGAACGGGAACTTTACAATGGAGGATGAATTGAAACCCAAAATAGGAAAAGAGTTTGGAAGCTGGGACGAAGCATGGGAATTTTGGCGAGATTATGCTAGAAGAACTGGTTTTGGGGCTAGAAAGTATAATGGTACAAAAAGCAGAAAAGATGGATCACTTATTACATATAGATATGTGTGTTCTAAAGAGGGTATTCGAAAAGAAGGTAAACAGGAGACATATTCTTCTAAGTACCGAGCAGAAACAAGGACTAACTGCAAGGCAAAAATGATAGTATCTATTGTTGATCAGAGGCATAAAATTACTAAATTTGATGAAGAGCATAATCATCCCCTTCACACACAAGAAACTGTGCACTTGTTAGCATCTCAAAGAAACTTATCAGAAGTTGATGCTTATGGAATTGAGCTAGCAAGAAAGTCTGGACTTCAACAGAAGGCTACATTTGATTTAATGAGTACATATGCCGGAGGCAAAGCAAATCTTGGATATACTCAAGTTGATATGCAAAATTATTTGCAATCTAGAAGGCAAAAAAGTATGAAATACGGAGAGGTAAGATGTCTGTTTGAATATTTTCAAAAGCAGCTTGCAGCGAATCCTGCATTCTACCATAAATATCAGGTGGACACAGAAGAAGAAATTACTAATGTGTTTTGGGCGGATGCTGGAATGCTAATAGATTATGCACTTTTTGGTGAGGTTTTATCTCTAGATACAACATTTTGTACAAACCGTGATCATCGACCTCTTGCAATATTTTCTGGCTTTAATCATTACAGAAGTGTAGTCATTTTTGGTGCAGCATTGTTGTATGACGAGACCACTGTGTCTTTCAAGTGGCTATTAGAAACTTTCCTGGAAGCTCATATGCAGAAAAAGCCTAAAACTGTGTTTACAGATCAAGATCAAGCAATGGCAAGAGCTTTGAGTGAAATTCTTCCTGATACAAAGCATTGTTTATGCACTTGGCATTTAAAGCAAAATGGTATTAAACACCTTGGAAATTTAATGAAAGATGGGTCACATTTTTTGACCGACTTCTGTAAATGCATGTCTAAAATTTCAGAGGAAGAAAAGTTTGAAGAAGCATGGAGCCAATTAATATCTTCTTATGATGTCCACAACAATCCATGGTTGACTTCCATGTATAATATCAAAGAGAAATGGGCTTGGTGCTATGTAAAGAATGCTTGCACATTAGGCATGAGAAGTACACAGCTTAGTGAAAGTGTGAATGCTGATGTAAAAAGATGCACAACTCCAAATTTAGATATCAATGAATTCTTTACCACTTTTGACAAAGTTGTTTCAGAGAAGCGAGACAAGGAATTGAAACTTGAGTTTGATTCCCGGCAAAAAATTCCTAGGATGGTCAATCAGAGTGCGCCTATATTGCGTCAACTTGTGCTAACTTATACCCCTGGTGCATTTGACATGTTCCAAGCACAATGGGATCTCCAATTCTCTGTGATGTTAACTCAACGTGATGAAAATGGACCATTATACATATACATTGCCCACATGATTGATGAAGAAGGGGAATGGAGAATTGAGTTTAAACCTGATACACATGAAATATCTTGCACTTGTGGAATGTTTGAAACCACTAGGATATTGTGCTGTCATGCATTGAAGGTGTATGAGTCAAATGATGTGAGAATTATGCCTGAGCAATACATTATTAAGCGATGGACCAGGGAAGCAAGGAGTGGTGTTGTGTATGATGTTAGGGGGAGTGAGATACAAAGAGATCCTAAACTTGAAATCACACGAAGATTTAGACACTTAATGTATAAGATGGTAAGATTGGCAACAAATGCGGCAAAGACTCATGAAAGTTTTGAGTGTGTTGACAAATACATCACTGAGATAGAAAATAAAGTTCCGAACAATAATGAAGATGTTCTTAACCCAAGTATAGCACCAATGGGAGGGCAGCTGAAGAAAAAGAAATCTCATCACTTGAAGTCATAG 2163 0.3782 MDCVEIERGDKRDWLEIMEEDEGMEGLLDTVTVPEKENRDGLHEARLKEGEGRDVGPREERRNGNFTMEDELKPKIGKEFGSWDEAWEFWRDYARRTGFGARKYNGTKSRKDGSLITYRYVCSKEGIRKEGKQETYSSKYRAETRTNCKAKMIVSIVDQRHKITKFDEEHNHPLHTQETVHLLASQRNLSEVDAYGIELARKSGLQQKATFDLMSTYAGGKANLGYTQVDMQNYLQSRRQKSMKYGEVRCLFEYFQKQLAANPAFYHKYQVDTEEEITNVFWADAGMLIDYALFGEVLSLDTTFCTNRDHRPLAIFSGFNHYRSVVIFGAALLYDETTVSFKWLLETFLEAHMQKKPKTVFTDQDQAMARALSEILPDTKHCLCTWHLKQNGIKHLGNLMKDGSHFLTDFCKCMSKISEEEKFEEAWSQLISSYDVHNNPWLTSMYNIKEKWAWCYVKNACTLGMRSTQLSESVNADVKRCTTPNLDINEFFTTFDKVVSEKRDKELKLEFDSRQKIPRMVNQSAPILRQLVLTYTPGAFDMFQAQWDLQFSVMLTQRDENGPLYIYIAHMIDEEGEWRIEFKPDTHEISCTCGMFETTRILCCHALKVYESNDVRIMPEQYIIKRWTREARSGVVYDVRGSEIQRDPKLEITRRFRHLMYKMVRLATNAAKTHESFECVDKYITEIENKVPNNNEDVLNPSIAPMGGQLKKKKSHHLKS 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral377g00011 720 SMART 26again6 589 616 IPR006564 GO:0008270
Pral377g00011 720 Pfam SWIM zinc finger 588 611 IPR007527 GO:0008270
Pral377g00011 720 Pfam MULE transposase domain 297 391 IPR018289 -
Pral377g00011 720 ProSiteProfiles Zinc finger SWIM-type profile. 578 614 IPR007527 GO:0008270
Pral377g00011 720 MobiDBLite consensus disorder prediction 696 720 - -
Pral377g00011 720 Pfam FAR1 DNA-binding domain 88 175 IPR004330 -
Pral377g00011 720 MobiDBLite consensus disorder prediction 38 66 - -
Pral377g00011 720 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 69 691 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral377g00011 Pral-Chr377 27780 31144 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pral377g00011 MULE 7.2e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral377g00011 - - pcin:129293091 937.176