Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral377g00009 ATGGGCAGGAAATGCTCGTATTGTGGAAACCTTGGCCACAATTCAAGGACTTGTAATATTATTCAGAGAATTGGCTTTGATGGTGGCCTCAAGATCTTTGGAGTGCAATTTGATCTTCCTCCTCCTCCTTCGTCTTCACCTACTAATTACAGTTATGGCATCAAAAGAAGTTTCAGCGTGGACTGCTTGCCGTCTTCCCAGAAAACCTTCATGTCTACCGCATCGTCCTCTTCATCTTCCTCCTCCTCACGTTCCCCGCTTGAACCCAAGGACAATTCAGATCACAAAATGTCTGATTCTTATTCAGCCGGAAGAACCCAGGAGATGAAGAATAAAGGAGTGCCATGGACGGCGGAGGAGCACCGGATATTTCTGATAGGGCTGAAGAAGCTGGGGAAGGGTGACTGGAGAGGCATCTCTAAGAATTATGTGACAACAAGAACACCAACCCAAGTGGCCAGCCATGCACAGAAACATTTCCTCCGTCAGAATCACGCGAATAAAAGAAAGCGCTATCAAACGCTTCTTGATATGGATGGACAAAATAATAACAGAGTCGAACCAGTAAAATATTCGCGCTTTTCTAAGCCCATTGAAGCTGCTGGGGCTTCTGAGACTATGAATATCGATGTCAGTTGCAGCAGCCACAGCAATGGCAAAAGGATTTGTCTCTCTCGGTGCCTTTCAAGTTATCATTCAGTGCTTAATTGGTCTGCCTCTTCACCAAAATGCGCTCTTCACAGCCTAGAACCTGATTTAGAGCTCAGGCTTGCGGCTCCACATTTTCTTTAA 792 0.4571 MGRKCSYCGNLGHNSRTCNIIQRIGFDGGLKIFGVQFDLPPPPSSSPTNYSYGIKRSFSVDCLPSSQKTFMSTASSSSSSSSSRSPLEPKDNSDHKMSDSYSAGRTQEMKNKGVPWTAEEHRIFLIGLKKLGKGDWRGISKNYVTTRTPTQVASHAQKHFLRQNHANKRKRYQTLLDMDGQNNNRVEPVKYSRFSKPIEAAGASETMNIDVSCSSHSNGKRICLSRCLSSYHSVLNWSASSPKCALHSLEPDLELRLAAPHFL 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral377g00009 263 SMART sant 112 162 IPR001005 -
Pral377g00009 263 Pfam Myb-like DNA-binding domain 115 159 IPR001005 -
Pral377g00009 263 MobiDBLite consensus disorder prediction 71 87 - -
Pral377g00009 263 CDD SANT 115 160 IPR001005 -
Pral377g00009 263 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 112 164 IPR017930 -
Pral377g00009 263 ProSiteProfiles SANT domain profile. 116 164 IPR017884 -
Pral377g00009 263 SUPERFAMILY Homeodomain-like 109 164 IPR009057 -
Pral377g00009 263 ProSiteProfiles Myb-like domain profile. 108 160 IPR001005 -
Pral377g00009 263 PANTHER TRANSCRIPTION FACTOR KUA1 3 200 - -
Pral377g00009 263 Gene3D - 116 166 - -
Pral377g00009 263 NCBIfam myb-like DNA-binding domain, SHAQKYF class 111 163 IPR006447 GO:0003677
Pral377g00009 263 FunFam transcription factor MYB1R1 114 165 - -
Pral377g00009 263 MobiDBLite consensus disorder prediction 71 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral377g00009 Pral-Chr377 21866 22935 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral377g00009 Myb_DNA-binding 2.9e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral377g00009 - - pcin:129304081 354.369