Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral377g00007 ATGAATGGAATTTCAATGCTCGCTGGAATGCAAGGTGAACTCATAAGTAGTCTCCAATTGGATGTTCCTCTAATGAATCCTGCCTGCATTGCTCATCCTAATTCCTTGGTTCCATCCCAAGGGAAGAACATTGTAGCTGATGCCTCACTTGGAAACCCATGTCCCCGAAACAACAGTGTGTTTCAAGATCAACGAGCTGGAGGCACAATCTCTCCTGCTTCCCCAGCTGCCACTCCTGCTGCAAGATTTGGTCTTGAAGAGAGCCTAGAAAAATCAGCAGCTTTGACTCCTTCAGTCTGTTCATTGGAGGCATTGGCACCATATATGTTGAGCAACTGGCAGGATAATTCAGACACTTTGCTTCCAACTTCTGGAGATCGTGGGTATGATACTAGGTTCCTGACCTATTCGTCCGCAGCGAACCTGGATCCAAACGGATGGACATCTTCAAATGCTGCAAACTTGACCCATCAGGGTTATGATTACCCAAATTTCAGGAATGAGCTCTCATTAAGTCTAGCGACCTCTCCCACCACAGGTCAGTGCTCAGAGGTGAGTTCTGATAGCTTGGAACAAGCCTCCTGTAGCAGTAAGGGGGTTTCTAGGAGTTTGGGTTCCAATAGACGTGTGAATTTTTCGCAAGCAATATTGGGGTCCGCATATCTTGCTGGGATTCAAGAAATACTTGCTCAAATTGCAAGGTATTCACTTGAAAATATAGAACAGATAAATTGTTCAGCTGGTTGCAGTAGAGCCAGAGCAGAAGGGAATATATCAACCTCAGCTCCTCCATTCAGGAGCATGACAGAGACAACAAATCACAATGCAGATTCTATGTTTGAAGCTCAAGCAAATTCTTCATTTGCAAGACACGATGCTGCTGAATCAAAGAAATCCCGGCTTCTGACACTTCTACAGCTGGTGGACAGTCGATATAATCAGTGTTTGGATGAGATACATACTGTTGTATCCGCATTTCATGCTGCTACAGAGTTGGACCCGCAAGTTCATACTCATTTTGCCCTTAAGACAATCTCTGTGCTGTACAAGGATTTGCGCGAGAGGATAAGCAATTATATCCTTTCCATGGGAGAAAGATTTAACAACTCCCGCTCAGAAGAAGAGAAGGAAAGGTCTACGGAAGCTTTATTCATCGAAAAGCACTGGGCCCTGCAGCAATTGAAAAGAAAAGGGCATCAGTTATGGAGGCCCCAAAGGGGCTTGCCAGAACGATCTGTCTCTGTCCTACGAGCCTGGATGTTTCAGAATTTCCTCCATCCGTATCCAAAAGATGCAGAGAAGCAGTTACTTGCAGTAAAAAGTGGACTGACGAGAAGCCAGGTATCAAACTGGTTCATTAATGCTCGTGTGAGGCTGTGGAAACCTTTGATTGAGGAAATGCACGCTGAAATGAACAGAAGAAAGGCTCTTCGAAATGAAGAGGGCACGCAGAGCAGCCACAGAAGCAGCAGGGTACGCCTGGGCAATCAAAGATTTACTACCAATTCAAAGTAA 1515 0.4521 MNGISMLAGMQGELISSLQLDVPLMNPACIAHPNSLVPSQGKNIVADASLGNPCPRNNSVFQDQRAGGTISPASPAATPAARFGLEESLEKSAALTPSVCSLEALAPYMLSNWQDNSDTLLPTSGDRGYDTRFLTYSSAANLDPNGWTSSNAANLTHQGYDYPNFRNELSLSLATSPTTGQCSEVSSDSLEQASCSSKGVSRSLGSNRRVNFSQAILGSAYLAGIQEILAQIARYSLENIEQINCSAGCSRARAEGNISTSAPPFRSMTETTNHNADSMFEAQANSSFARHDAAESKKSRLLTLLQLVDSRYNQCLDEIHTVVSAFHAATELDPQVHTHFALKTISVLYKDLRERISNYILSMGERFNNSRSEEEKERSTEALFIEKHWALQQLKRKGHQLWRPQRGLPERSVSVLRAWMFQNFLHPYPKDAEKQLLAVKSGLTRSQVSNWFINARVRLWKPLIEEMHAEMNRRKALRNEEGTQSSHRSSRVRLGNQRFTTNSK 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral377g00007 504 Pfam Associated with HOX 216 357 IPR006563 -
Pral377g00007 504 Gene3D - 397 476 - -
Pral377g00007 504 ProSiteProfiles 'Homeobox' domain profile. 399 462 IPR001356 GO:0003677
Pral377g00007 504 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 151 483 - -
Pral377g00007 504 SMART prehox3 210 358 IPR006563 -
Pral377g00007 504 MobiDBLite consensus disorder prediction 488 504 - -
Pral377g00007 504 Pfam Homeobox KN domain 419 458 IPR008422 GO:0003677|GO:0006355
Pral377g00007 504 SUPERFAMILY Homeodomain-like 404 470 IPR009057 -
Pral377g00007 504 SMART HOX_1 402 466 IPR001356 GO:0003677
Pral377g00007 504 MobiDBLite consensus disorder prediction 475 504 - -
Pral377g00007 504 CDD homeodomain 402 462 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral377g00007 Pral-Chr377 3598 6280 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral377g00007 167 475 Homeobox Transcription Factor Family AT4G32980 57.143 3.15e-110 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Pral377g00007 POX 1.4e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral377g00007 - - gmx:100812648 531.946