LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral3772g00065	ATGGACTTCTTCTCTGACAACAATCTCAAGCCTTCCTCTTCCTCGTCCAACCATGATTCCTCTACTCCTCCTCATCCTCTTGAATTATTCAGAGTAAACACTGGTCTCAATCTCTTGACTACAAACGGTGACCAATCCGTAGTGAACAATGCGTTTGACATATGTTCTAATTTTAAAGAGAAAAAAGCCAAGATCGGCGAGTTGCTGACTGAGATTGCTGTTCTTCGAGCTGAGTTAGAGCAGATAATGGGAGAAAATCATAAGCTGAAGGACACGTTAAATAAGGTTAACACTAATTATAATGCCTTAAAGATGCATTTGGACTTTATCGAGTCTAGCAAGGGCAGTAAGGAGGACGCCGAAGAGAATCCTGAAAACGAAAGTCCAAAAGACAAGAAACAGACTGAGAGTAACAAAGAAACCTTAGTTCCTAGGCAATTTATAGAACTTGGATTAGCTTCGATCAATGGTGTTGGGACTAATAGCGATGAGCCTTCGCTTTCATCGTCTGTAAGGAGAAGTAGTGACAGATCAAGATCACCCCTGTCAGTGGAATGTAGCGCCAGAATTATTGGTTCTGATGATAAGAAGGAATTCAACAGAGAATTTGAAAGTAGTGAAGAAGAAACTGATGGGAATATTAATCAAAAGTATAGTCCTCCCACAAATGTTGATGATCAGCTGGAAGCCATTATGAGGAAGGCAAGAGTCGCAGTTAGAGTTCAATCAGAAGCACCTATGATTACTGATGGCTGTCAATGGAGAAAATATGGGCAGAAGATGGCCAAAGGAAATCCATGCCCAAGAGCTTATTATCGCTGCACCATGGCTGCAGGTTGTCCAGTAAAGAAACAGGTGCAAAGGTGTGCAGAGGATCGAACAATCTTGGTAACAACATATGAAGGAAGTCATAACCACGCATTGCCTCCGGCAGCAATGGCGATGGCACAAACAACAGCAGCAGCAATAAGGACATCACTTTCAGGATCAATGTCAAGCAATGATAGTCTAAGGAATGCAAGCTTCTTGGCAAGGACGACATTGTTGCCTTGTTCTTCAAGTAACATGGCAACTCTCTCAGCCTCAGCTCCATTTCCAACTATTACATTGGACTTAACTATTCCTCCAACTACACAACCTTCTACCCAATTTCAAATGCCTTTCTCAAATAATACGCCTCTTGATTTTACTCAGGTTTTGGCTCAAGCATTTCGTAGCAGCAATCAATCAAACTTTTCAGGGCTTCAAATAAATAACAAAGACCCTTTACAATTGAGTGCTGCTATAGCAGCTGACCCTAACTTCACAACAGCTTTAACAGCGGCTATTACTTCTATTATGGGTTCTGCTTTGCCAAATAATAATTGCAACACAACACAGCAAATTGATGAAGAAATTTCCTTTTCCAGTTAG	1413	0.4119	MDFFSDNNLKPSSSSSNHDSSTPPHPLELFRVNTGLNLLTTNGDQSVVNNAFDICSNFKEKKAKIGELLTEIAVLRAELEQIMGENHKLKDTLNKVNTNYNALKMHLDFIESSKGSKEDAEENPENESPKDKKQTESNKETLVPRQFIELGLASINGVGTNSDEPSLSSSVRRSSDRSRSPLSVECSARIIGSDDKKEFNREFESSEEETDGNINQKYSPPTNVDDQLEAIMRKARVAVRVQSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVKKQVQRCAEDRTILVTTYEGSHNHALPPAAMAMAQTTAAAIRTSLSGSMSSNDSLRNASFLARTTLLPCSSSNMATLSASAPFPTITLDLTIPPTTQPSTQFQMPFSNNTPLDFTQVLAQAFRSSNQSNFSGLQINNKDPLQLSAAIAADPNFTTALTAAITSIMGSALPNNNCNTTQQIDEEISFSS	470

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral3772g00065	470	MobiDBLite	consensus disorder prediction	156	223	-	-
	Pral3772g00065	470	Pfam	WRKY DNA -binding domain	250	306	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Pral3772g00065	470	MobiDBLite	consensus disorder prediction	190	211	-	-
	Pral3772g00065	470	Gene3D	WRKY domain	233	310	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Pral3772g00065	470	Coils	Coil	58	99	-	-
	Pral3772g00065	470	MobiDBLite	consensus disorder prediction	113	139	-	-
	Pral3772g00065	470	MobiDBLite	consensus disorder prediction	1	26	-	-
	Pral3772g00065	470	PANTHER	WRKY TRANSCRIPTION FACTOR 36-RELATED	45	457	IPR044810	GO:0003700
	Pral3772g00065	470	MobiDBLite	consensus disorder prediction	156	182	-	-
	Pral3772g00065	470	MobiDBLite	consensus disorder prediction	113	142	-	-
	Pral3772g00065	470	ProSiteProfiles	WRKY domain profile.	243	309	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Pral3772g00065	470	FunFam	probable WRKY transcription factor 31	233	310	-	-
	Pral3772g00065	470	MobiDBLite	consensus disorder prediction	1	23	-	-
	Pral3772g00065	470	SUPERFAMILY	WRKY DNA-binding domain	241	309	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Pral3772g00065	470	SMART	WRKY_cls	248	308	IPR003657	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral3772g00065	Pral-Chr3772	1307304	1309710	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral3772g00065	32	447	WRKY Transcription Factor Family	AT1G62300	45.374	1.65e-97	302

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Pral3772g00065		WRKY	6.7e-24	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral3772g00065	-		-	pcin:129313060	566.229