Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3772g00062 ATGCCTTTTTCTGCAAGCTGGATCACTTCCCTCTCTTGTTCTTCCCCTGGGAAACAAGTCCCAGGTGGTACGTTGACTCAATGGCTCGAATTTGTCTTCCTCTCTCCATGTCCTCAGAGAGCTCTCATGGCCGCCATTGATGTTTTACTCATCTTCGTACTCTTCGTGCTTGCCGTCAAGAAGCTCTGTTCCAGGTTCGCCTCTAATGGCAGAGAGTCAGCTTCTGAACTTGGCAAGCCCCTTATCAGACATAACAGAGATTTCATCAGAACAACAACGTGGTTTAAGCTAACTCTAATTGTGACGGTTGTTTTGACTATATCCTACGTTGTTGCGTGTGTTCTGGGATTTGTCAGAAACAACCAAGTCGATGGATTGTTTTGGTTAGTTCAAGCCGTGACTCATGCGATTGTTGCAATCTTAATCATTCATGAAAAGAGATTCCAAGCTGTTTCTCATCCTATTCCACTTCGAATCTTTTGGATTGTGAACTTCGTAGTCACTTGTTTGTTCGTAATTTCTGGGGTTGTTCGTTTGGTCTCTGTGGAAGAAACTGAAGCAGGCTATGACTTTAGGAATGATGATACTGTCTGTTTCATCTCCTTCCCTCTTTCTCTTTTTCTCTCTCTTGTTGCCATTAAAGGATCTACTGGGATCAGTTTCACACCCGAAACTGAATCGCTAATTGATGGGGAAACTCATATCAAATCGAACGTGACTGGTTTTGCCTCAGCTTCGTTGGCATCCAAAGCCTTCTGGCTATGGATAAATCCATTGTTGAGTAAAGGTTACAAGTCGCCTTTGAAGATTGATGAAGTCCCATCACTTTCTCCAGACCATAGAGCCGAAAGAATGTCAGTTTTGTTCGAACAGAAATGGCCTAAGCCACAAGAAAGATCGAAGCATCCTGTTCTAATCACACTTCTTCGATGCTTCTGGAAGGAAGTGGCATTCACTGCTTTCCTTGCTATTGTTCGACTCAGTGTTATGTTCGTAGGTCCAGTTCTTATCCAAAGCTTTGTTGATTTCACAGCGGGTAAGAGAAGCTCTGTTTATGAAGGGTACTACTTGGTGTTAATCCTTTTGGTTGCAAAATTCATAGAAGTTTTAGCCACTCATCATTTCAACTTCAACTCTCAGAAGCTAGGAATGCTTATCCGATGTTCTCTTATTACATCATTGTACAAGAAAGGGTTAAGGTTGTCTTGTTCGGCAAGACAAGACCATGGTATTGGAACTATTGTGAATTATATGGCTGTGGATGCACAACAACTTTCTGATATGATGTTGCAGCTTCATGCTGTGTGGATGATGCCATTTCAAGTTGGAATTGCCTTATTTCTGCTGTACAAATACTTAGGTGCTGCAGTCGTCACAGCCTTACTTGGAATTTTGTGTGTTCTTGTGTTTGTGGTATTTGGAACTCGAAGAAACAACCGTTTCCAGTTCAACGTGATGAAGAATCGCGATTCGCGAATGAAAGCTGTTAATGAGATGCTAAATTACATGAGAGTGATCAAGTTCCAAGCATGGGAAGAGCATTTCAATAAGAGGATTATGGGTTTTCGTGAATCAGAATTCAGCTGGCTTTCTAAGTTTATGTATTCAATTTCTGGGAATATTATTGTGATGTGGAGCACACCGTTGTTGATCTCAACTCTAACATTTGGGACAGCAATTTTGCTCAGAGTTCGACTTGATGCTGGCACGGTTTTCACCACAACAACAATCTTTAAAATATTGCAGGAACCTATTAGGACGTTCCCACAATCAATGATCTCTCTTTCACAAGCCATGATATCACTTGGGAGGTTGGATAGGTATATGATGAGCAAGGAATTATCAGACAATTCAGTTGAGAGACAGGAAGGCTGCGATGGACAAACTGCGGTAGAGGTGAAAGATGGCATCTTTAGCTGGGATGATGATGATAGTAAAACGGATTATGATTTGAAGAACATTAATTTGAACATCAGAAAAGGCGATCTCACCGCCATTGTTGGCACCGTCGGCTCAGGAAAATCTTCTCTCCTAGCATCAATTCTTGGGGAGATGCACAAGGTTTCTGGCAAGGTTCGAGTTTGTGGGAGTACAGCGTATGTAGCTCAAACATCATGGATTCAAAATGGGACGATTCAGGACAACATCCTGTATGGATTACCAATGGACAGACAGAAGTACAATGAAGTTGTGAGGGTTTGTTGTTTGGACAAGGACTTGGAAATGATGGAAGATGGGGATCAGACAGAGATTGGAGAGCGTGGCATCAACCTTAGTGGGGGACAGAAGCAGAGAATACAGCTTGCTAGGGCTGTATATCAAGACTGTGATATCTATCTTCTCGATGATGTCTTTAGCGCTGTCGATGCTCATACTGGCTCTGCAATATTCAAGGAATGTGTTAGGGGAGCTCTAAAAGCCAAGACTATTATTCTTGTGACACACCAAGTAGACTTCCTGCATAATGTTGATCTTATAATGGTGATGAGAGATGGAATGATAGTCGAATCGGGCAAGTATAATGATCTGTTAAATTCTGGACTGGATTTTGGAGATTTGGTTGCAGCACATGAGACTTCAATGGAACTTGTAGAGCAAGGTAAAGAGTTGCCTGGTGAAAATTCCCCAAGACCAGCCAAATCTCCCAGATCTCCAAAGCCAGCTTCTACTTTCAGAGAGACCAATGGTGAAAGCAATTCTCTTGACCAGCCCAAGACTGGCAAGGAAAATTCTAAACTCATCAAAGATGAAGAGAGGGAAACTGGCAAAGTGAGCCTGCATATTTATAAACTGTATTGTACTGAGGCTTATGGATGGTGGGGCATTACAGGAGTAATTCTAATTTCTTTGATATGGCAAGCATCTTTAATGGCTGGTGATTATTGGCTGGCATATGAAACCTCCGAAGAGCAAGCTCGAGTCTTTAACCCGTCTCTTTTTATCTCCATCTATGCCATTATTGCGGCAGTTTCAGTTGTTTTGGTGATATTTAGATCCTTCTCTGTCACCATCTTGGGGCTTAAGACAGCACAAATTTTCTTCTCTCAGATTCTTGATAGCATCCTTCATGCACCCATGTCTTTCTTTGATACCACGCCTTCTGGAAGAATCTTAAGTCGGGCATCCACTGATCAGACTAATGTTGATGTGTTTCTCCCATTCTTTTTGGGTATTGTGATTTCCATGTACATCACAGTACTTGGCATCTTCATTGTGACATGTCAGAATTCTTGGCCAACAGTTTTCTTGCTGATTCCTCTGATTTGGTTGAACATATGGTATCGGGGTTATTTCCTTTCTTCATCTCGTGAATTAACTCGGCTGGATTCAATAACAAAAGCACCTGTGATTCATCATTTCTCAGAAAGCATTTCTGGGGTCATGACAATTCGTGCATTCAGAAAGCAGAGGAGTTTTTGTGAAGAAAATGTTAAACGAGTGAATGAAAATCTGCGGATGGATTTCCACAACAATGGTTCCAATGAGTGGTTGGGTTTTCGCTTAGAATTGCTCGGAAGCTTGGTCTTTTGTATTTCCACTATGTTCATGATTATATTACCCAGCAATATCATAAAACCAGAAAACGTTGGCTTATCCCTCTCTTATGGGTTGTCTCTGAATGCTGTGTTGTTCTGGGCCATATATATGAGTTGCTTCATTGAGAACAAAATGGTATCTGTGGAGAGGATTAAGCAGTTCACAAGAATTCCATCTGAAGCAGCATGGCGAATTAAAGATCGCCTGCCTCCTCCGAATTGGCCTGCCCATGGCAATGTTAACATCAAAGATTTGCAGGTTAGGTACCGTGCCAATACTCCTTTGGTTCTTAAAGGCCTCAACTTGAGCATTAGTGGGGGAGAGAAGATTGGCGTTGTTGGAAGAACAGGAAGTGGAAAATCTACTTTAATCCAAGTTTTCTTCAGGCTAGTAGAACCTTCAGGAGGCCGAATAATCATCGACGACATCGACATAACCGCATTAGGCCTCCACGATCTCAGGTCTCGTTTCGGAATCATCCCCCAGGAGCCTGTTCTTTTTGAGGGCACAGTTAGGAGCAACATTGATCCAACGGGTCAATATTCAGATGAGGACATATGGAAGAGCTTGGAACGCTGTCAACTAAAAGATGCCGTGGCTTCCAAGCCAGAGAAACTGGACTCTTTAGTGGTTGATAATGGGGAGAATTGGAGTGTGGGGCAGAGGCAGTTACTGTGTTTGGGGAGAGTGATGCTGAAGAGAAGCCGGCTATTGTTCTTGGATGAAGCAACGGCTTCTGTGGATTCACAAACTGATGCTGTGATTCAGAAGATCATCAGAGAGGACTTTGGCTGCACCATCATTAGCATTGCTCACAGAATTCCAACTGTCATGGACTGTGATAGGGTTCTCGTCATAGATGCAGGGCGAGCGAAAGAATTTGATAAACCTTCCAAGTTGCTTCAGAGGCCATCATTATTTGGGGCATTGGTTCAAGAATATGCCAATCGCTCCTCAGAGCTCTGA 4503 0.4259 MPFSASWITSLSCSSPGKQVPGGTLTQWLEFVFLSPCPQRALMAAIDVLLIFVLFVLAVKKLCSRFASNGRESASELGKPLIRHNRDFIRTTTWFKLTLIVTVVLTISYVVACVLGFVRNNQVDGLFWLVQAVTHAIVAILIIHEKRFQAVSHPIPLRIFWIVNFVVTCLFVISGVVRLVSVEETEAGYDFRNDDTVCFISFPLSLFLSLVAIKGSTGISFTPETESLIDGETHIKSNVTGFASASLASKAFWLWINPLLSKGYKSPLKIDEVPSLSPDHRAERMSVLFEQKWPKPQERSKHPVLITLLRCFWKEVAFTAFLAIVRLSVMFVGPVLIQSFVDFTAGKRSSVYEGYYLVLILLVAKFIEVLATHHFNFNSQKLGMLIRCSLITSLYKKGLRLSCSARQDHGIGTIVNYMAVDAQQLSDMMLQLHAVWMMPFQVGIALFLLYKYLGAAVVTALLGILCVLVFVVFGTRRNNRFQFNVMKNRDSRMKAVNEMLNYMRVIKFQAWEEHFNKRIMGFRESEFSWLSKFMYSISGNIIVMWSTPLLISTLTFGTAILLRVRLDAGTVFTTTTIFKILQEPIRTFPQSMISLSQAMISLGRLDRYMMSKELSDNSVERQEGCDGQTAVEVKDGIFSWDDDDSKTDYDLKNINLNIRKGDLTAIVGTVGSGKSSLLASILGEMHKVSGKVRVCGSTAYVAQTSWIQNGTIQDNILYGLPMDRQKYNEVVRVCCLDKDLEMMEDGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSAIFKECVRGALKAKTIILVTHQVDFLHNVDLIMVMRDGMIVESGKYNDLLNSGLDFGDLVAAHETSMELVEQGKELPGENSPRPAKSPRSPKPASTFRETNGESNSLDQPKTGKENSKLIKDEERETGKVSLHIYKLYCTEAYGWWGITGVILISLIWQASLMAGDYWLAYETSEEQARVFNPSLFISIYAIIAAVSVVLVIFRSFSVTILGLKTAQIFFSQILDSILHAPMSFFDTTPSGRILSRASTDQTNVDVFLPFFLGIVISMYITVLGIFIVTCQNSWPTVFLLIPLIWLNIWYRGYFLSSSRELTRLDSITKAPVIHHFSESISGVMTIRAFRKQRSFCEENVKRVNENLRMDFHNNGSNEWLGFRLELLGSLVFCISTMFMIILPSNIIKPENVGLSLSYGLSLNAVLFWAIYMSCFIENKMVSVERIKQFTRIPSEAAWRIKDRLPPPNWPAHGNVNIKDLQVRYRANTPLVLKGLNLSISGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDDIDITALGLHDLRSRFGIIPQEPVLFEGTVRSNIDPTGQYSDEDIWKSLERCQLKDAVASKPEKLDSLVVDNGENWSVGQRQLLCLGRVMLKRSRLLFLDEATASVDSQTDAVIQKIIREDFAXCTIISIAHRIPTVMDCDRVLVIDAGRAKEFDKPSKLLQRPSLFGALVQEYANRSSEL 1501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3772g00062 1501 CDD ABC_6TM_ABCC_D2 942 1234 IPR044726 GO:0140359
Pral3772g00062 1501 MobiDBLite consensus disorder prediction 864 916 - -
Pral3772g00062 1501 SMART AAA_5 660 841 IPR003593 GO:0016887
Pral3772g00062 1501 SMART AAA_5 1285 1478 IPR003593 GO:0016887
Pral3772g00062 1501 Pfam ABC transporter transmembrane region 975 1195 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral3772g00062 1501 Pfam ABC transporter transmembrane region 318 584 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral3772g00062 1501 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 944 1222 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral3772g00062 1501 CDD ABCC_MRP_domain2 1257 1477 - -
Pral3772g00062 1501 MobiDBLite consensus disorder prediction 887 907 - -
Pral3772g00062 1501 Pfam ABC transporter 1276 1424 IPR003439 GO:0005524
Pral3772g00062 1501 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 243 1495 - -
Pral3772g00062 1501 Pfam ABC transporter 651 784 IPR003439 GO:0005524
Pral3772g00062 1501 SUPERFAMILY ABC transporter transmembrane region 939 1239 IPR036640 GO:0005524|GO:0016020
Pral3772g00062 1501 FunFam ABC transporter C family member 5 905 1240 - -
Pral3772g00062 1501 FunFam ABC transporter C family member 10 300 613 - -
Pral3772g00062 1501 SUPERFAMILY ABC transporter transmembrane region 299 609 IPR036640 GO:0005524|GO:0016020
Pral3772g00062 1501 CDD ABCC_MRP_domain1 631 832 - -
Pral3772g00062 1501 CDD ABC_6TM_ABCC_D1 318 605 IPR044746 GO:0140359
Pral3772g00062 1501 Gene3D - 625 859 IPR027417 -
Pral3772g00062 1501 Gene3D - 1243 1491 IPR027417 -
Pral3772g00062 1501 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 628 854 IPR027417 -
Pral3772g00062 1501 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1259 1493 IPR003439 GO:0005524
Pral3772g00062 1501 FunFam ABC transporter C family member 4 614 874 - -
Pral3772g00062 1501 Coils Coil 1130 1150 - -
Pral3772g00062 1501 FunFam ABC transporter C family member 3 1242 1493 - -
Pral3772g00062 1501 Gene3D ABC transporter type 1, transmembrane domain 289 613 IPR036640 GO:0005524|GO:0016020
Pral3772g00062 1501 Gene3D ABC transporter type 1, transmembrane domain 905 1240 IPR036640 GO:0005524|GO:0016020
Pral3772g00062 1501 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1251 1492 IPR027417 -
Pral3772g00062 1501 ProSitePatterns ABC transporters family signature. 758 772 IPR017871 GO:0005524|GO:0016887
Pral3772g00062 1501 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 631 856 IPR003439 GO:0005524
Pral3772g00062 1501 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 317 597 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3772g00062 Pral-Chr3772 1235660 1243193 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3772g00062 631 849 Calmodulin-binding Proteins AT2G36910 32.627 2.65e-24 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3772g00062 - K05666 gmx:100793361 2367.04