Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3772g00054 ATGGATGAGCAGGACAATCAGAACCAAGCTCCTCCGCCTCCCCCAGTTGCAGAGCCTCAGTCTCAACCTCAACTAGAGGAAGGGGTGGGGGAGGAAGAAGACGCGTCCAAGAAGGAGGAGGACGAGTTGGTGTCGAAGGCTCAAAGCTTGATGGAGAAGATCACCTCTGCGCCTGATAACCCTAAACCTGCTGTGCTTCATGCCCTTGCCTCCATTCTTGAAACCCAAGAGTTCCGATACATGGAAGAGAATGGTCATTCCTCCTCTAGTAATGCTCGTGCCTCTCATAATGTTGGGCGCCTCGGGAGCTTAATCAGGGAAAATGATGAATTCTTTGAGTTGATATCGTCTAAGTTTTTGTCAGAGACAAGGTACACTACTTCCATTCAGGCTGCTGCTACTAGGCTTCTTCTGAGCTGTTCGTTGACTTGGATTTATCCTCATGATTTTGAAGATCCTGTTCGGGATAACATTAAAGAGTGGGTCATGGATGAAAATATCAGATCTTCTGTGGAAGAACAGAACTTGAAGCATAACCCAGGGCAAAGGGAAGCCTCAGATTCCGAAATGTTGAAAACCTATTCAACTGGACTCCTTGCTGTGTGTTTGGCCGGTGGAGGTTCAGTAGTTGAAGATGTATTGACATCTGGCTTGTCAGCTAAGCTTATGCGATATCTTCGTTTTTGTGTGCTGGGAGAAACAAGTAGCAGCCAGAAGGATACTGGTCATTTAACTGAGACTAAGCATGCTTCTACAAATACTTCAACAAAAGGTAGAGATGATGGTCGTGGTAGATTTCGTCAGGCCCTGGAATCAAGTCATTTAGATGATACAAGGATGGCTGATGAGAGGGCCTTAGATGACCGAACTCTTGAAATGGATCAAGATAGAGGCATTACTGTACAAACTTGCCTAGAAGAGTCTTGGGTTGATGGTGAGATACCTGATGGATTGGGTGAAGGTGCTGATGCTGACGGGGGTGATAGATGGCATGGTAGAGATGCACGTGATGGAAGGATAAAATTTGGTGATCATGATGACAACACAAGAGATGACTCTTCACAGCGGCGTGCAAACCGTGCATGGTTTAGACCCAGAGGAAAGGGAAGGTTCAGTGATGGGACTGTAGAAAGTGAACCTATTCTGTCATCTCCGGGTTCTGTTAGTCAATTAGGACAGGGAAGGAATGTCAGAGATAGGAGCATAATAAGGAATGCTGATGCTAGAAGGGTGACTGATTCCAGGAAGACCTTTGCCAGGATCAATTCTGAAGCTTCTGCTTTGGAAAGAGAGGATAATGATGATTGTTTTCAGGGTTGCCATATTGGAAGCAAAGATATTTCTGATCTTGTTAGGAAAGCAGTCCGAGCAGCTGAAGCTGAAGCGCGAGCTGCCAATGCACCAGAAGAAGCTGTAAAAGCAGCTGGTGATGCTGCTGCGGAACTGGTTAGGACTGCGGCTTCAGATGAACTTAACTCCACTAATGATGAAGAAGCTGCTGTTCTGGCTGCTTCCAGAGCTGCATCAACTGTCATTGATGCTGCTTCTGCAATTGAAGTTTCAAGGAATTCCAGCGTCAATGATGAAACAGAGAATGCATGTAGCAGAGAAACTGAATCTGGTGAGGAGCTTGAGGATTACTTCATCCCAGATAGTCAATCGCTTGCATTGCTGAGGGAAAAATATTGCATTCAGTGCCTTGAAATGCTTGGAGAATATGTTGAAGTTCTTGGACCTGTATTGCATGAGAAGGGGGTGGATGTGTGTCTTGCACTTCTTCATCAGAATTCTAAACTTCGGGAGGCATCTAAGGTTGCCCTGCTGTTGCCTGATATCATGAAACTGATCTGTGCTTTGGCGGCTCATCGGAAATTTGCTGCTCTGTTTGTGGACCGTGGGGGCATGCAAAAATTGCTTGCAGTTCCAAGAATGGCTCAAACTTATTTTGGACTTTCTTCCTGCCTATTTACTATTGGTTCTTTGCAGGGAATTATGGAACGGGTCTGTGCTCTTCCATCAGACGTGGTCTATCATGTGGTTGAATTGGCTCTCCAACTAGTTGACTGCTCCCAAGACCAAGCCCGGAAGAATGCAGCATTGTTTTTTGCTGCTGCATTTGTCTTTAGAGCAGTTCTTGATGCTTTTGATGCTCAGGATGGATTGCAGAAGTTACTGGGCCTTCTAAATGATGCTGCTGCTGTAAGATCAGGCGTAAATTCTGGGGCCTTGAGCCTCTCAAGTGGATCATTTCGAAATGATCGATCACCTGCAGAAGTCCTGACATCATCTGAGAAGCAGATAGCTTATCACACTTGTGTTGCTTTGCGGCAATATTTTAGAGCACATCTTCTTTTACTGGTGGATTCCATTCGCCCAAACAAAAGCAATCGTAGTGGTGCTAGGAATATTCCAAGTGCAAGAGCAGCATACAAGCCACTGGACATTAGTAATGAGGCAATTGATGCAGTATTCCTGCAACTACAGAAAGATCGGAAGCTAGGTCCTGCATTTGTTAGAACACGTTGGCCTGCGGTTGAGAAGTTCTTGGCATATAATGGGCATGCTACGATGCTGGAGTTGTGTCAGGCTCCACCTGTGGAACGATATTTGCATGATTTGCTTCAATATGCATTGGGTGTCCTGCACATCGTTACACTGGTACCCAGCAGTCGCAAGATGATTGTGAACACAACATTAAGCAATAATCGTGTTGGCATAGCAGTCATTTTGGATGCAGCAAACATTGCTACTAGTCATGTGGACCCTGAGATTATTCAGCCTGCATTGAGTGTGTTAGTTAATCTTGTTTGTCCTCCACCATCAATCAGCAATAAGCCACCTCTAATTGCACAAGGTCAGCAGTCAGCTTCTACCCAGACCACAAGTGGTCCTCCTACGGAGACAAGAGACAGAAACAATGAGCGTAACATCTCAGACAGAGCTGTTCATATTTCTAACCAGACTGATCAAAGGGAGCAGAATGGAGAATCTGGTGTTATGGATCGAGTTAGTGCTGCCACAGCTACTACACAGATTGCTAACACCACCCCACAAACTCCTGGTGCCACTGCAACTTCAGGATTGGTTGGCGACCGTAGAATATCTCTGGGTGCTGGAGCAGGCTGTGCTGGTCTGGCTGCCCAACTGGAACAAGGATATCGTCAAGCCAGAGAGGCTGTCCGCTCTAATAATGGAATTAAAGTCCTGCTGCATCTCCTCCAACCACGTATATATTCACCTCCTGCTGCTTTAGACTGCCTCCGTGCTCTAGCATGTCGAGTCCTACTTGGTTTAGCCAGAGATGATACTATTGCACACATATTGACGAAGCTTCAGGTAGGGAAAAAGCTATCTGAACTGATAAGAGATTCAGGCAGTCAGACACCTGGTACAGAACAGGGAAGGTGGCAAACTGAACTTTCCCAGGCTGCAATTGAGCTAATTGGGATTGTGACCAACTCAGGTCGTGCTAGTACGTTAGCAGCTACTGATGCAGCTACTCCTACATTAAGGCGTATTGAAAGAGCAGCAATAGCTGCTGCCACTCCTATTACTTACCATTCTAGGGAACTTTTGCTCCTAATTCATGAGCACCTGCAAGCATCTGGGTTGTCCCTAACTGCCTCTACATTGCTTAAAGAGGCTCAGTTGAATCCTTTGCCATCGTTGGTTGCTCCGTCATCTCTTGCACAAGCAGCCACCTCACAGGAAGCTACTTCAATACAACTTAGTTGGCCCTCTGGCCGGACTCAGTCTGGATTTCTCACTAGCAAATTAAAGCATAATGCAAAGGATGAGGATTCCAGCATGAAGCAAGATTCAGCCATCTCTTCTAAGAAAAAGACACTGACTTTCTCATCTTCTTTTGGCCTACATTCAAGACATCAATCTGTTGATTCTCAGCAGTCACTAGTAAGAAGAGGATTGACTACTGGGAAGGAGCTTTCTGAATCTTCAAGTTCATTAGAAACTCCCTCAGAACCTTCAATGAAACATAACATTGATGGAGAGTCTCAGTATAAGACCCCGATAATCTTGCCTATGAAACGCAAGTTACCTGATTTGAAGGATATAGGAGTATTGTCATCATCTGGAAAGCGACTAAATGCTGGGGATCAAGGACTTCGATCACCTATTTGTCCAACTCCAAGTACGACCCGTAAAAGCAGCCTGCAGAATGATGCTGTTGGGTTTTTTACTCCAAGTTCCACCCTGAGAAGCCAACAAGGGCGATGCATAGGTGAGTATGTGGATGAAGGCCAATTAAACAGCTCAAATCCTGGTCAAGTAACACCATCCTCCCAAATATCAAGTGACCAGCCTAACAATCAAGAGCGTTTAACATTAGACTCTCTAGTAGTTCAGTATTTGAAACATCAGCATCGCCAATGCCCAGCTCCTATTACCACTCTTCCTCCACTATCTCTTTTGCATCCACATGTCTGTCCTGAACCAAAGCGAAGCCTTGATGCCCCATCTAATGTGACTGCTCGGCTTGCTACGCGTGAATTGAAGCATACGTATGGAGGAGTGCATGGGAATCGTAGGGACCGACAATTTGTTTATAGCAGGTTTAGGCCATGGCGTACATGTCGGGATGATGCTGGTGCATTATTGACATGCATTACTTTTATTGGGGACTCATCACGGATTGCTGTTGGGAGCCACAATGGTGAGCTCAAAATATTTGACTCCAACAATAATAATGTGGTGGAGACCTTTACATCTCATCAGTCTCCTTTGACACTTGTCCAATCTTTTGTTTCGGGAGAGACTCAACTATTGCTTTCTTCAAGCTCCCAAGATGTGAGGCTGTGGGATGCATCAGCAATAGCAATGGATCCTACCCATTCATTTGATGGGTGCAAAGCTGCCAGGTTTAGCAATAGTGGCAATGTTTTTGCTGCCTTGTCATCAGAGTCTGCTCGACGGGAAATCCTCTTGTATGATATTCAAACTGCTCAATTAGAGTCAAAGCTATCAGATACATTCGCAAATTCAACAGGAAGGGGTCATGTCTATTCCATGATACATTTTAGTCCTTCTGACTCAATGCTGCTTTGGAATGGTGTCTTATGGGATCGGCGGGCCCCTGGGCCTGTTCATCGCTTTGATCAGTTCACAGACTATGGGGGCGGGGGCTTTCATCCTGCTGGAAATGAGGTTATTATAAACTCAGAAGTCTGGGATTTGCGTAAATTCAGATTGCTACGAAGTGTGCCTTCTTTAGATCAAACGGCAATAACATTCAATGGACGTGGTGATGTAATTTATGCAATCCTAAGGCGAAATATTGAGGATGTAATGTCAGCAGTCCATACGCGTCGGGTCAAACATAATCTTTTTTCAGCTTTCCGCACTGTGGATGCGGTCAATTATTCTGATATTGCTACCATTCAAGTGGATCGCTGCGTGCTTGATTTTGCAACTGAGCCAACTGATTCATTTGTTGGGTTGATTACAATGGATGATCAAGATGAGATGTTTGCATCTGCCAGGATCTATGAAATTGGCAGGAGGAGACCTACTGACGATGATTCTGATCCTGATGATGCTGAAAGTGAGGAGGAAGACGATGATGACGACGATGACGACGATGCAAATGTGGATCCTTTACTTGGCCCTGGACTTGGTGGGGAAAGTGAGAGTGATGCTGATGACTTGAGCAACGATGAAGATGATGATAGTATAACAGATCTTGACAATGACGACGATGATGGGGATTTCATTATGGATGATTTAGACTTTGATGGAGGAACTGGAATTTTGGAGATTGTGACAGAAGGCGATGAGGATGATGATGATGATAGTCAAGTACTTGAATCCTTAAGTAGCGGTGAAGAGGATTTTGTTGGTAATGGCTTTGGTTATTAG 5874 0.4515 MDEQDNQNQAPPPPPVAEPQSQPQLEEGVGEEEDASKKEEDELVSKAQSLMEKITSAPDNPKPAVLHALASILETQEFRYMEENGHSSSSNARASHNVGRLGSLIRENDEFFELISSKFLSETRYTTSIQAAATRLLLSCSLTWIYPHDFEDPVRDNIKEWVMDENIRSSVEEQNLKHNPGQREASDSEMLKTYSTGLLAVCLAGGGSVVEDVLTSGLSAKLMRYLRFCVLGETSSSQKDTGHLTETKHASTNTSTKGRDDGRGRFRQALESSHLDDTRMADERALDDRTLEMDQDRGITVQTCLEESWVDGEIPDGLGEGADADGGDRWHGRDARDGRIKFGDHDDNTRDDSSQRRANRAWFRPRGKGRFSDGTVESEPILSSPGSVSQLGQGRNVRDRSIIRNADARRVTDSRKTFARINSEASALEREDNDDCFQGCHIGSKDISDLVRKAVRAAEAEARAANAPEEAVKAAGDAAAELVRTAASDELNSTNDEEAAVLAASRAASTVIDAASAIEVSRNSSVNDETENACSRETESGEELEDYFIPDSQSLALLREKYCIQCLEMLGEYVEVLGPVLHEKGVDVCLALLHQNSKLREASKVALLLPDIMKLICALAAHRKFAALFVDRGGMQKLLAVPRMAQTYFGLSSCLFTIGSLQGIMERVCALPSDVVYHVVELALQLVDCSQDQARKNAALFFAAAFVFRAVLDAFDAQDGLQKLLGLLNDAAAVRSGVNSGALSLSSGSFRNDRSPAEVLTSSEKQIAYHTCVALRQYFRAHLLLLVDSIRPNKSNRSGARNIPSARAAYKPLDISNEAIDAVFLQLQKDRKLGPAFVRTRWPAVEKFLAYNGHATMLELCQAPPVERYLHDLLQYALGVLHIVTLVPSSRKMIVNTTLSNNRVGIAVILDAANIATSHVDPEIIQPALSVLVNLVCPPPSISNKPPLIAQGQQSASTQTTSGPPTETRDRNNERNISDRAVHISNQTDQREQNGESGVMDRVSAATATTQIANTTPQTPGATATSGLVGDRRISLGAGAGCAGLAAQLEQGYRQAREAVRSNNGIKVLLHLLQPRIYSPPAALDCLRALACRVLLGLARDDTIAHILTKLQVGKKLSELIRDSGSQTPGTEQGRWQTELSQAAIELIGIVTNSGRASTLAATDAATPTLRRIERAAIAAATPITYHSRELLLLIHEHLQASGLSLTASTLLKEAQLNPLPSLVAPSSLAQAATSQEATSIQLSWPSGRTQSGFLTSKLKHNAKDEDSSMKQDSAISSKKKTLTFSSSFGLHSRHQSVDSQQSLVRRGLTTGKELSESSSSLETPSEPSMKHNIDGESQYKTPIILPMKRKLPDLKDIGVLSSSGKRLNAGDQGLRSPICPTPSTTRKSSLQNDAVGFFTPSSTLRSQQGRCIGEYVDEGQLNSSNPGQVTPSSQISSDQPNNQERLTLDSLVVQYLKHQHRQCPAPITTLPPLSLLHPHVCPEPKRSLDAPSNVTARLATRELKHTYGGVHGNRRDRQFVYSRFRPWRTCRDDAGALLTCITFIGDSSRIAVGSHNGELKIFDSNNNNVVETFTSHQSPLTLVQSFVSGETQLLLSSSSQDVRLWDASAIAMDPTHSFDGCKAARFSNSGNVFAALSSESARREILLYDIQTAQLESKLSDTFANSTGRGHVYSMIHFSPSDSMLLWNGVLWDRRAPGPVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKFRLLRSVPSLDQTAITFNGRGDVIYAILRRNIEDVMSAVHTRRVKHNLFSAFRTVDAVNYSDIATIQVDRCVLDFATEPTDSFVGLITMDDQDEMFASARIYEIGRRRPTDDDSDPDDAESEEEDDDDDDDDDANVDPLLGPGLGGESESDADDLSNDEDDDSITDLDNDDDDGDFIMDDLDFDGGTGILEIVTEGDEDDDDDSQVLESLSSGEEDFVGNGFGY 1957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3772g00054 1957 SMART WD40_4 1567 1607 IPR001680 GO:0005515
Pral3772g00054 1957 SMART WD40_4 1612 1650 IPR001680 GO:0005515
Pral3772g00054 1957 SMART WD40_4 1524 1564 IPR001680 GO:0005515
Pral3772g00054 1957 SUPERFAMILY ARM repeat 679 1149 IPR016024 -
Pral3772g00054 1957 MobiDBLite consensus disorder prediction 236 264 - -
Pral3772g00054 1957 MobiDBLite consensus disorder prediction 236 252 - -
Pral3772g00054 1957 MobiDBLite consensus disorder prediction 377 396 - -
Pral3772g00054 1957 SUPERFAMILY WD40 repeat-like 1530 1755 IPR036322 GO:0005515
Pral3772g00054 1957 FunFam DDB1-and CUL4-associated factor homolog 1 1522 1849 - -
Pral3772g00054 1957 SMART Lish 1187 1219 IPR006594 GO:0005515
Pral3772g00054 1957 MobiDBLite consensus disorder prediction 1419 1442 - -
Pral3772g00054 1957 MobiDBLite consensus disorder prediction 1311 1336 - -
Pral3772g00054 1957 MobiDBLite consensus disorder prediction 946 967 - -
Pral3772g00054 1957 MobiDBLite consensus disorder prediction 1884 1913 - -
Pral3772g00054 1957 PANTHER VPRBP PROTEIN-RELATED 34 1953 IPR033270 GO:0016567
Pral3772g00054 1957 MobiDBLite consensus disorder prediction 1418 1442 - -
Pral3772g00054 1957 MobiDBLite consensus disorder prediction 979 994 - -
Pral3772g00054 1957 MobiDBLite consensus disorder prediction 1848 1869 - -
Pral3772g00054 1957 MobiDBLite consensus disorder prediction 312 397 - -
Pral3772g00054 1957 MobiDBLite consensus disorder prediction 944 1004 - -
Pral3772g00054 1957 MobiDBLite consensus disorder prediction 322 359 - -
Pral3772g00054 1957 MobiDBLite consensus disorder prediction 1837 1915 - -
Pral3772g00054 1957 MobiDBLite consensus disorder prediction 1927 1942 - -
Pral3772g00054 1957 ProSiteProfiles LIS1 homology (LisH) motif profile. 1187 1219 IPR006594 GO:0005515
Pral3772g00054 1957 MobiDBLite consensus disorder prediction 1927 1957 - -
Pral3772g00054 1957 MobiDBLite consensus disorder prediction 1 45 - -
Pral3772g00054 1957 Gene3D - 1525 1849 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3772g00054 Pral-Chr3772 1090916 1101391 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3772g00054 1551 1757 U-box Gene Family AT2G33340 24.336 4.55e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3772g00054 K11789 - gmx:100800133 2742.61