Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3765g00012 ATGCAGGAGGAGGATCAGAAGCTGATTGAATCAGCAAAGGGAGAAATAAGAGAGGTTAGAAGAGAAAACGAGAGGTTGAAAGTACTATTGGAACAGATTGTGAAGGAGTCCGAATCACTTCAAATGCATTTCTTTGACGTCCTTAAACAAGAAGAAGACAAGACTAAAAATGCTGCTACAATGATGGGAACAGGGGATCATAGCCCTAGTACTCATCATGAACAAAATGATGAGCTTCTCTCTCTTTCATTAGGGTTTTCATCATCCAAAGGTTGCAGAAGTAGAAATACGAATGTGAAAGAGGAAAATGAGAAGGATTTGGCAGAACCAGGACTTGCACTAGGGCTTGATGTCAGATTTGACCCTTCATCAAGTAAAATTATTGAAGGTACAGACATAATAGCCATTGAAGGTAGCTCTGGTGATGATGAGGAAGAGAAGGAAGAAGAAGCCACTGAGTTGCAGCCAGCCGGTAAGGTTCTCAAGACGATGACAAGCAAAGGGGATCAAACTACTTCTGAATCTTCTCATCAACATCAGCTCAAGAAAACTAGGGTTTCTATCCGAGCCAGATGTGATACTCAAACGATGAATGATGGATGTCAATGGAGAAAATATGGACAGAAAATATCAAAGGGAAATCCATGCCCAAGGGCGTACTACAGATGCACCATGTCACCATCCTGTCCTGTGAGAAAACAGGTGCAAAGATGCGCAGAGGATATATCCATCTTGATAAGCACATATGAAGGAACTCATAATCACCCTCTTCCTATGCCTTCTTCGATAATGCTTCAATCTCCTTGCTCTTTCACTTCCCTCTCCAATAATAATAATGCTCCTCTAATAATTCCTCCCTCTTCACAACAACCAAAAACCAAATTTGCCTCCTTCTTCACTCATAATAGTGCTCTCAATAGCTTCTCTAAGGCCTCTTCCATTATTCCATCCTCTACTTTCAATCCCACAACCAAACTTGATCTCACTTCCTCTTCTTCCTCTCATCATCAGTTCAGAACATTCACTTCCGTAGGCTTATTCTCTTCCAGACCAAGACTTGCTTCTCATTATCCACCATCTCCTTCACAATCTTTGATCTCTCCTTATTATAATGGAACGTCAAGCCAAAATAGTGGGAAACAACCATTAACAATGCAACAAGGGAGAATTGAAGCTGCAACAAAAGCAGTCACCACTAATCCCAAGTCCCAGTCAGCCATTGCAGCCGCTCTCACTTCCTGTGTTACTAGTAGTAGTAGTAATATTGGAAATGGCTTATTGGACTGCACTGTTTCATCATCATCAAGGTCTATGATGAACATAAATGTGTCTTCTTCTTCTTCTTCTGTGATCAATAATGCTCAACAAGCTGGAAATATGATAGAAGCAACAATGGAAAAGGAAGAATTTGAATATTACTCCGAAGGAACCAAACCTGTGATTATTATCAGTAAGAGAAAAGACAACCTAAGTAGAGGTGAAGATATGGATCCGCTGAAATACCCCTTACTCATTGTGACTCTTAATGAAGGTAGAGACAAGGATTTTAATGCATGGCGGGAGAGCTGCTGGAGAAGGAAGACCCGAACGTGTTTGTGTGATATTGGGATGGAAGATCTTCCAACATTGGCAATGATGAGAGCTGGAGGAAGGGAGGGAATGGGAGGTGTAGTTGAAGAAGATGAAACATATCACAATGGAAGGGGTAGGAGTGTAGTGGTTTGGCAGAGTGTGGGTGGGATAATGGCCGTTAGTTTGACTATGAAGGTTGAGGTGTTGCCGCGGAAGGAGGAAATGATGATGGCGTGA 1809 0.4179 MQEEDQKLIESAKGEIREVRRENERLKVLLEQIVKESESLQMHFFDVLKQEEDKTKNAATMMGTGDHSPSTHHEQNDELLSLSLGFSSSKGCRSRNTNVKEENEKDLAEPGLALGLDVRFDPSSSKIIEGTDIIAIEGSSGDDEEEKEEEATELQPAGKVLKTMTSKGDQTTSESSHQHQLKKTRVSIRARCDTQTMNDGCQWRKYGQKISKGNPCPRAYYRCTMSPSCPVRKQVQRCAEDISILISTYEGTHNHPLPMPSSIMLQSPCSFTSLSNNNNAPLIIPPSSQQPKTKFASFFTHNSALNSFSKASSIIPSSTFNPTTKLDLTSSSSSHHQFRTFTSVGLFSSRPRLASHYPPSPSQSLISPYYNGTSSQNSGKQPLTMQQGRIEAATKAVTTNPKSQSAIAAALTSCVTSSSSNIGNGLLDCTVSSSSRSMMNINVSSSSSSVINNAQQAGNMIEATMEKEEFEYYSEGTKPVIIISKRKDNLSRGEDMDPLKYPLLIVTLNEGRDKDFNAWRESCWRRKTRTCLCDIGMEDLPTLAMMRAGGREGMGGVVEEDETYHNGRGRSVVVWQSVGGIMAVSLTMKVEVLPRKEEMMMA 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3765g00012 602 SMART WRKY_cls 197 257 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral3765g00012 602 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 7 421 IPR044810 GO:0003700
Pral3765g00012 602 Coils Coil 2 36 - -
Pral3765g00012 602 ProSiteProfiles WRKY domain profile. 192 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral3765g00012 602 MobiDBLite consensus disorder prediction 355 381 - -
Pral3765g00012 602 FunFam probable WRKY transcription factor 31 182 259 - -
Pral3765g00012 602 Pfam WRKY DNA -binding domain 198 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral3765g00012 602 Gene3D WRKY domain 182 259 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral3765g00012 602 MobiDBLite consensus disorder prediction 164 186 - -
Pral3765g00012 602 SUPERFAMILY WRKY DNA-binding domain 190 258 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3765g00012 Pral-Chr3765 125761 135742 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3765g00012 2 415 WRKY Transcription Factor Family AT1G18860 33.524 1.12e-55 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral3765g00012 WRKY 3.5e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3765g00012 - - pcin:129295149 335.109