LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral3765g00009	ATGGGAAAAGATCCTGGGAAATGGATAAAGACCTTGTTTTCAGGGAAGAAATCATCAAAGTCTAATCGATCAAGCCAAAAAAATATCTTGAAACCTTCAAGTAACCAGGATGTGTTGGCCTCTATTGATACATCTGTGCCTTATATCCCTGATTCTTCGCTGATATCCGCACCCACATCTGGAGCTGATGCTAGTAAAGAAGTGCTCTTGGAAAATGTACTGGTTAGTAGATCATCAAATGAGCGGAATATTCTTTCAGCTGGGATTGAAGAGAACAATGCAGAAGCTATTAATTCTGGTTCACTGGATGATGTCCAGAAAAACAGGCTTGTTGAAGCTGCTACAAAAATCCAGGCTGGTTTTAGGGGCTATCAGGCTCGTGAGGAATTTCAGACACTAAAAGGTGTCATACAACTGCAAGCTCTTATTCGAGGCCAGTTGGTTAGGAGGCAAGCTGTTTCCACTTTATACTGTGTGAAGGGAATTGTAAAAGTTCAAGCGCTAGTTCGCGGTCACAAGGTTCGACATTCTGATATTGGGGTCGCTGTCCTCAAAATTTTCAAGGATGCTAAATGTTCAAATTCTAACGGAGTAGTCACGACTACACAGGCAGAGAAGCTGCCAACCGGTCTTTTTCTTAACCAGCTTCTGGCCACGTCATCCTCAACAGTTCCTTTACATCTTAATTTTGGTCCTGAAGCACCAAACTTCACCTGGAAGTGGCTTGAGCGCTGGACTAAGTCAAACTTTTGGGCGCCTCCTCCCAAATCAGAGAAGAACCATGGCAAGTCCAACGAGAAAAGTGCCAATTGTCAAACGTTTGAACATAACAAGGGGAAACCCAAGAGAAGTTTCAAGAAGGCTTCTGATTTGAAAGTCGATGATGGCTCAACCTCAGGGCCAAACAATCTTAAACAGCCTGCGAAAAAGGTTTCAAGCCACCTTATGCAGTCATCACGGGAGCAACCACAAACGGAAACAAAAAACCGTATTAAGAAAACTTCGACGCAGAGTGTTTGTAGTACATCTGAGGTTGCCCCTGAGAAAAGGAAACGCATCCATGGAAAACTTCCAGGTCATTCTGTTACTGATGTTTCAGAGCATCGTGCTTGCGTTTCAGCAGATAAAATGAAAAGTTTGGGAGTGTCAAAGTCACAGCAGTCTGATTTTGAAAAGAGCCTTGGGTTGCAAGAAAAAGATGAGAATGTCCACTCACACGCAAATCCTACTGCTGATTCGCAGACTAGCGTAAAGAATGGTAAAGAAGTTATTCAAGGAGATAGCGAGGACTCTAAAATTAATGGGGACCCTCAGAACTCGCTGAGAAGAGCTTCACTGCCTGCCAGTTTCAATGATCAAGATAATAACAGTTCCCATAACACTCCAAGAGTTCCTAGCTATATGGCCCCCACTGAATCTGCAAAAGCTAAGCTAAGAGCACAAGGCTCTCCTGGGTTTGCTGGTGACTTGGTAGATAAAATTGGTGTAACCAGGCGTCATTCACTTTCAACTTCATTAAATGGAAGGTTTACCTCATTTTCCCCACGAACAGAACGACTGTTAAACACAAGCAGCAGAGGAGTGATCAGGACTGACAGATCTCTGTCATTATTAAGGGATGGACCTGAGAAGTTCATCCAACCCCAGTGGAGAAGGTGA	1659	0.4358	MGKDPGKWIKTLFSGKKSSKSNRSSQKNILKPSSNQDVLASIDTSVPYIPDSSLISAPTSGADASKEVLLENVLVSRSSNERNILSAGIEENNAEAINSGSLDDVQKNRLVEAATKIQAGFRGYQAREEFQTLKGVIQLQALIRGQLVRRQAVSTLYCVKGIVKVQALVRGHKVRHSDIGVAVLKIFKDAKCSNSNGVVTTTQAEKLPTGLFLNQLLATSSSTVPLHLNFGPEAPNFTWKWLERWTKSNFWAPPPKSEKNHGKSNEKSANCQTFEHNKGKPKRSFKKASDLKVDDGSTSGPNNLKQPAKKVSSHLMQSSREQPQTETKNRIKKTSTQSVCSTSEVAPEKRKRIHGKLPGHSVTDVSEHRACVSADKMKSLGVSKSQQSDFEKSLGLQEKDENVHSHANPTADSQTSVKNGKEVIQGDSEDSKINGDPQNSLRRASLPASFNDQDNNSSHNTPRVPSYMAPTESAKAKLRAQGSPGFAGDLVDKIGVTRRHSLSTSLNGRFTSFSPRTERLLNTSSRGVIRTDRSLSLLRDGPEKFIQPQWRR	552

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral3765g00009	552	Pfam	Protein of unknown function (DUF4005)	453	530	IPR025064	-
	Pral3765g00009	552	Gene3D	-	107	156	-	-
	Pral3765g00009	552	MobiDBLite	consensus disorder prediction	295	344	-	-
	Pral3765g00009	552	MobiDBLite	consensus disorder prediction	431	467	-	-
	Pral3765g00009	552	SMART	iq_5	132	153	IPR000048	GO:0005515
	Pral3765g00009	552	SMART	iq_5	157	179	IPR000048	GO:0005515
	Pral3765g00009	552	SMART	iq_5	109	131	IPR000048	GO:0005515
	Pral3765g00009	552	MobiDBLite	consensus disorder prediction	252	467	-	-
	Pral3765g00009	552	MobiDBLite	consensus disorder prediction	345	374	-	-
	Pral3765g00009	552	MobiDBLite	consensus disorder prediction	407	422	-	-
	Pral3765g00009	552	MobiDBLite	consensus disorder prediction	12	34	-	-
	Pral3765g00009	552	ProSiteProfiles	IQ motif profile.	134	161	IPR000048	GO:0005515
	Pral3765g00009	552	PANTHER	IQ-DOMAIN 5-RELATED	1	505	-	-
	Pral3765g00009	552	MobiDBLite	consensus disorder prediction	14	34	-	-
	Pral3765g00009	552	Pfam	IQ calmodulin-binding motif	134	151	IPR000048	GO:0005515
	Pral3765g00009	552	Pfam	IQ calmodulin-binding motif	112	131	IPR000048	GO:0005515
	Pral3765g00009	552	Pfam	IQ calmodulin-binding motif	160	175	IPR000048	GO:0005515
	Pral3765g00009	552	MobiDBLite	consensus disorder prediction	276	293	-	-
	Pral3765g00009	552	ProSiteProfiles	IQ motif profile.	110	138	IPR000048	GO:0005515

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral3765g00009	Pral-Chr3765	62911	68224	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral3765g00009	1	552	IQD Protein Family	AT2G02790	34.253	9.17e-76	249

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral3765g00009	-		-	aprc:113869184	510.375