Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pral3765g00008 | ATGGGAAAAGATCCTGGGAAATGGATAAAGACCTTGTTTTCAGGGAAGAAATCATCAAAGTCTAATCGATCAAGCCAAAAAAATATCTTGAAACCTTCAAGTAACCAGGATGTGTTGGCCTCTATTGATACATCTGTGCCTTATATCCCTGATTCTTCGCTGATATCCGCACCCACATCTGGAGCTGATGCTAGTAAAGAAGTGCTCTTGGAAAATGTACTGGTTAGTAGATCATCAAATGAGCGGAATATTCTTTCAGCTGGGATTGAAGAGAACAATGCAGAAGCTATTAATTCTGGTTCACTGGATGATGTCCAGAAAAACAGGCTTGTTGAAGCTGCTACAAAAATCCAGGCTGGTTTTAGGGGCTATCAGGCTCGTGAGGAATTTCAGACACTAAAAGGTGTCATACAACTGCAAGCTCTTATTCGAGGCCAGTTGGTTAGGAGGCAAGCTGTTTCCACTTTATACTGTGTGAAGGGAATTGTAAAAGTTCAAGCGCTAGTTCGCGGTCACAAGGTTCGACATTCTGATATTGGGGTCGCTGTCCTCAAAATTTTCAAGGCAGAGAAGCTGCCAACCGGTCTTTTTCTTAACCAGCTTCTGGCCACGTCATCCTCAACAGTTCCTTTACATCTTAATTTTGGTCCTGAAGCACCAAACTTCACCTGGAAGTGGCTTGAGCGCTGGACTAAGTCAAACTTTTGGGCGCCTCCTCCCAAATCAGAGAAGAACCATGGCAAGTCCAACGAGAAAAGTGCCAATTGTCAAACGTTTGAACATAACAAGGGGAAACCCAAGAGAAGTTTCAAGAAGGCTTCTGATTTGAAAGTCGATGATGGCTCAACCTCAGGGCCAAACAATCTTAAACAGCCTGCGAAAAAGGTTTCAAGCCACCTTATGCAGTCATCACGGGAGCAACCACAAACGGAAACAAAAAACCGTATTAAGAAAACTTCGACGCAGAGTGTTTGTAGTACATCTGAGGTTGCCCCTGAGAAAAGGAAACGCATCCATGGAAAACTTCCAGGTCATTCTGTTACTGATGTTTCAGAGCATCGTGCTTGCGTTTCAGCAGATAAAATGAAAAGTTTGGGAGTGTCAAAGTCACAGCAGTCTGATTTTGAAAAGAGCCTTGGGTTGCAAGAAAAAGATGAGAATGTCCACTCACACGCAAATCCTACTGCTGATTCGCAGACTAGCGTAAAGAATGGTAAAGAAGTTATTCAAGGAGATAGCGAGGACTCTAAAATTAATGGGGACCCTCAGAACTCGCTGAGAAGAGCTTCACTGCCTGCCAGTTTCAATGATCAAGATAATAACAGTTCCCATAACACTCCAAGAGTTCCTAGCTATATGGCCCCCACTGAATCTGCAAAAGCTAAGCTAAGAGCACAAGGCTCTCCTGGGTTTGCTGGTGACTTGGTAGATAAAATTGGTGTAACCAGGCGTCATTCACTTTCAACTTCATTAAATGGAAGGTTTACCTCATTTTCCCCACGAACAGAACGACTGTTAAACACAAGCAGCAGAGGAGTGATCAGGACTGACAGATCTCTGTCATTATTAAGGGATGGACCTGAGAAGTTCATCCAACCCCAGTGGAGAAGGTGA | 1614 | 0.4368 | MGKDPGKWIKTLFSGKKSSKSNRSSQKNILKPSSNQDVLASIDTSVPYIPDSSLISAPTSGADASKEVLLENVLVSRSSNERNILSAGIEENNAEAINSGSLDDVQKNRLVEAATKIQAGFRGYQAREEFQTLKGVIQLQALIRGQLVRRQAVSTLYCVKGIVKVQALVRGHKVRHSDIGVAVLKIFKAEKLPTGLFLNQLLATSSSTVPLHLNFGPEAPNFTWKWLERWTKSNFWAPPPKSEKNHGKSNEKSANCQTFEHNKGKPKRSFKKASDLKVDDGSTSGPNNLKQPAKKVSSHLMQSSREQPQTETKNRIKKTSTQSVCSTSEVAPEKRKRIHGKLPGHSVTDVSEHRACVSADKMKSLGVSKSQQSDFEKSLGLQEKDENVHSHANPTADSQTSVKNGKEVIQGDSEDSKINGDPQNSLRRASLPASFNDQDNNSSHNTPRVPSYMAPTESAKAKLRAQGSPGFAGDLVDKIGVTRRHSLSTSLNGRFTSFSPRTERLLNTSSRGVIRTDRSLSLLRDGPEKFIQPQWRR | 537 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pral3765g00008 | 537 | MobiDBLite | consensus disorder prediction | 237 | 452 | - | - | |
| Pral3765g00008 | 537 | SMART | iq_5 | 132 | 153 | IPR000048 | GO:0005515 | |
| Pral3765g00008 | 537 | SMART | iq_5 | 157 | 179 | IPR000048 | GO:0005515 | |
| Pral3765g00008 | 537 | SMART | iq_5 | 109 | 131 | IPR000048 | GO:0005515 | |
| Pral3765g00008 | 537 | Pfam | IQ calmodulin-binding motif | 160 | 175 | IPR000048 | GO:0005515 | |
| Pral3765g00008 | 537 | Pfam | IQ calmodulin-binding motif | 112 | 131 | IPR000048 | GO:0005515 | |
| Pral3765g00008 | 537 | Pfam | IQ calmodulin-binding motif | 134 | 151 | IPR000048 | GO:0005515 | |
| Pral3765g00008 | 537 | Gene3D | - | 107 | 156 | - | - | |
| Pral3765g00008 | 537 | MobiDBLite | consensus disorder prediction | 416 | 452 | - | - | |
| Pral3765g00008 | 537 | MobiDBLite | consensus disorder prediction | 12 | 34 | - | - | |
| Pral3765g00008 | 537 | ProSiteProfiles | IQ motif profile. | 134 | 161 | IPR000048 | GO:0005515 | |
| Pral3765g00008 | 537 | MobiDBLite | consensus disorder prediction | 261 | 278 | - | - | |
| Pral3765g00008 | 537 | MobiDBLite | consensus disorder prediction | 330 | 359 | - | - | |
| Pral3765g00008 | 537 | Pfam | Protein of unknown function (DUF4005) | 438 | 515 | IPR025064 | - | |
| Pral3765g00008 | 537 | MobiDBLite | consensus disorder prediction | 392 | 407 | - | - | |
| Pral3765g00008 | 537 | MobiDBLite | consensus disorder prediction | 14 | 34 | - | - | |
| Pral3765g00008 | 537 | PANTHER | IQ-DOMAIN 5-RELATED | 1 | 490 | - | - | |
| Pral3765g00008 | 537 | MobiDBLite | consensus disorder prediction | 280 | 329 | - | - | |
| Pral3765g00008 | 537 | ProSiteProfiles | IQ motif profile. | 110 | 138 | IPR000048 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pral3765g00008 | Pral-Chr3765 | 62911 | 68225 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pral3765g00008 | 1 | 537 | IQD Protein Family | AT2G02790 | 34.091 | 3.85e-75 | 247 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pral3765g00008 | - | - | aprc:113869184 | 483.026 |