LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral3765g00007	ATGGGAAAAGATCCTGGGAAATGGATAAAGACCTTGTTTTCAGGGAAGAAATCATCAAAGTCTAATCGATCAAGCCAAAAAAATATCTTGAAACCTTCAAGTAACCAGGATGTGTTGGCCTCTATTGATACATCTGTGCCTTATATCCCTGATTCTTCGCTGATATCCGCACCCACATCTGGAGCTGATGCTAGTAAAGAAGTGCTCTTGGAAAATGTACTGGTTAGTAGATCATCAAATGAGCGGAATATTCTTTCAGCTGGGATTGAAGAGAACAATGCAGAAGCTATTAATTCTGGTTCACTGGATGATGTCCAGAAAAACAGGCTTGTTGAAGCTGCTACAAAAATCCAGGCTGGTTTTAGGGGCTATCAGGCTCGTGAGGAATTTCAGACACTAAAAGGTGTCATACAACTGCAAGCTCTTATTCGAGGCCAGTTGGTTAGGAGGCAAGCTGTTTCCACTTTATACTGTGTGAAGGGAATTGTAAAAGTTCAAGCGCTAGTTCGCGGTCACAAGGTTCGACATTCTGATATTGGGGTCGCTGTCCTCAAAATTTTCAAGCTTCTGGCCACGTCATCCTCAACAGTTCCTTTACATCTTAATTTTGGTCCTGAAGCACCAAACTTCACCTGGAAGTGGCTTGAGCGCTGGACTAAGTCAAACTTTTGGGCGCCTCCTCCCAAATCAGAGAAGAACCATGGCAAGTCCAACGAGAAAAGTGCCAATTGTCAAACGTTTGAACATAACAAGGGGAAACCCAAGAGAAGTTTCAAGAAGGCTTCTGATTTGAAAGTCGATGATGGCTCAACCTCAGGGCCAAACAATCTTAAACAGCCTGCGAAAAAGGTTTCAAGCCACCTTATGCAGTCATCACGGGAGCAACCACAAACGGAAACAAAAAACCGTATTAAGAAAACTTCGACGCAGAGTGTTTGTAGTACATCTGAGGTTGCCCCTGAGAAAAGGAAACGCATCCATGGAAAACTTCCAGGTCATTCTGTTACTGATGTTTCAGAGCATCGTGCTTGCGTTTCAGCAGATAAAATGAAAAGTTTGGGAGTGTCAAAGTCACAGCAGTCTGATTTTGAAAAGAGCCTTGGGTTGCAAGAAAAAGATGAGAATGTCCACTCACACGCAAATCCTACTGCTGATTCGCAGACTAGCGTAAAGAATGGTAAAGAAGTTATTCAAGGAGATAGCGAGGACTCTAAAATTAATGGGGACCCTCAGAACTCGCTGAGAAGAGCTTCACTGCCTGCCAGTTTCAATGATCAAGATAATAACAGTTCCCATAACACTCCAAGAGTTCCTAGCTATATGGCCCCCACTGAATCTGCAAAAGCTAAGCTAAGAGCACAAGGCTCTCCTGGGTTTGCTGGTGACTTGGTAGATAAAATTGGTGTAACCAGGCGTCATTCACTTTCAACTTCATTAAATGGAAGGTTTACCTCATTTTCCCCACGAACAGAACGACTGTTAAACACAAGCAGCAGAGGAGTGATCAGGACTGACAGATCTCTGTCATTATTAAGGGATGGACCTGAGAAGTTCATCCAACCCCAGTGGAGAAGGTGA	1578	0.4354	MGKDPGKWIKTLFSGKKSSKSNRSSQKNILKPSSNQDVLASIDTSVPYIPDSSLISAPTSGADASKEVLLENVLVSRSSNERNILSAGIEENNAEAINSGSLDDVQKNRLVEAATKIQAGFRGYQAREEFQTLKGVIQLQALIRGQLVRRQAVSTLYCVKGIVKVQALVRGHKVRHSDIGVAVLKIFKLLATSSSTVPLHLNFGPEAPNFTWKWLERWTKSNFWAPPPKSEKNHGKSNEKSANCQTFEHNKGKPKRSFKKASDLKVDDGSTSGPNNLKQPAKKVSSHLMQSSREQPQTETKNRIKKTSTQSVCSTSEVAPEKRKRIHGKLPGHSVTDVSEHRACVSADKMKSLGVSKSQQSDFEKSLGLQEKDENVHSHANPTADSQTSVKNGKEVIQGDSEDSKINGDPQNSLRRASLPASFNDQDNNSSHNTPRVPSYMAPTESAKAKLRAQGSPGFAGDLVDKIGVTRRHSLSTSLNGRFTSFSPRTERLLNTSSRGVIRTDRSLSLLRDGPEKFIQPQWRR	525

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral3765g00007	525	MobiDBLite	consensus disorder prediction	225	440	-	-
	Pral3765g00007	525	SMART	iq_5	132	153	IPR000048	GO:0005515
	Pral3765g00007	525	SMART	iq_5	157	179	IPR000048	GO:0005515
	Pral3765g00007	525	SMART	iq_5	109	131	IPR000048	GO:0005515
	Pral3765g00007	525	Pfam	Protein of unknown function (DUF4005)	426	503	IPR025064	-
	Pral3765g00007	525	MobiDBLite	consensus disorder prediction	404	440	-	-
	Pral3765g00007	525	MobiDBLite	consensus disorder prediction	12	34	-	-
	Pral3765g00007	525	ProSiteProfiles	IQ motif profile.	134	161	IPR000048	GO:0005515
	Pral3765g00007	525	MobiDBLite	consensus disorder prediction	318	347	-	-
	Pral3765g00007	525	MobiDBLite	consensus disorder prediction	249	266	-	-
	Pral3765g00007	525	MobiDBLite	consensus disorder prediction	14	34	-	-
	Pral3765g00007	525	Pfam	IQ calmodulin-binding motif	160	175	IPR000048	GO:0005515
	Pral3765g00007	525	Pfam	IQ calmodulin-binding motif	112	131	IPR000048	GO:0005515
	Pral3765g00007	525	Pfam	IQ calmodulin-binding motif	134	151	IPR000048	GO:0005515
	Pral3765g00007	525	MobiDBLite	consensus disorder prediction	268	317	-	-
	Pral3765g00007	525	PANTHER	IQ-DOMAIN 5-RELATED	1	478	-	-
	Pral3765g00007	525	Gene3D	-	107	156	-	-
	Pral3765g00007	525	ProSiteProfiles	IQ motif profile.	110	138	IPR000048	GO:0005515
	Pral3765g00007	525	MobiDBLite	consensus disorder prediction	380	395	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral3765g00007	Pral-Chr3765	62911	68225	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral3765g00007	1	525	IQD Protein Family	AT2G02790	33.929	7.38e-74	243

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral3765g00007	-		-	gmx:100800548	470.314