LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral3760g00005	ATGTCCCAGACAGATGTTAACGGTGTAGCCCGGGGAGGTTCTTGCTTCAAGAAGGCTAGATTTGGTGCTGACGTTATCATTGCAAATATTGACGGTGGTAGCTGGCCTGAATCTCAAAGCTTTTCTGATGAGGGAATGGGACCCATTCCTTCAAGGTGGAAAGGAGCCTGTGATGAGCAAGTTGAAGTCTTGTATTATGAATGCAGGAAGTTGATAGGAGCAAGGTTCTTCAACAAGGGCTATATGAGTGATGCTAGGGGTGCTGCAAGCTCAAGTGAAGGACTGAAGACTGAACTTCACACTCCAAGAGACTACGATGGCCACGGCACTCACACTCTCTCAACAGCAGCAGGCTGCTTTGTTCACGGCGTCAATATCTTTGACCGCCTGGCCAACGGTACTGCCTCCGGCGGCTCCCCCATGGCAAGAGTCGCCGCCTACAAGGTCTGCTGGCCGGACATGTATGACCAGTCCAGCCTCTCCTGCCATGATTCCGATATACTCGCCGCCTTCGATATGGCCATACACGACGGCGTTCATGTCATTTCCGTGTCTCTGGGAAGTAATTTTCCTCAGAGTTACTTAAACGGCATCAATGTCGTCTGCTCCGGTGGAAATGCGGGTCCATTCCCTCAATCTGTCATCAATGTCGCGCCTTGGGTCTTCACAGTAGCTGCTAGCACCATAGACAAGGACTTCCAAGCTCGAGTTCAACTCCGCGATGGCCAAATCTTCCAGGGAGCAAGCCTTTCTAAAGCATTGCCACAAGACAGGTTCTACCCGCTCATAGCCGGTGCGGAGGCAAGGAGGTCTAATTCAACCATTGATGATGCGAATTTGTGTTTAATAGGGACGATAGATCCCAAGAAGGTGAAGGGAAAGATCTTGGTTTGCTTGACAAGTGATGATGATGATGGCTATTCAGTGAAAATGGAGAAAGGGTATGAGGCGTTACAAGCTGGTGCGGCTGCAATGATCCTTTGCAGTAGTAGTAAAAAAGATGCCACAAGAATTTACATGCATTTGCTTCCAGCAGCACACATTAAATACAAAGACACTCTATCTTTGCTTGCTTACCTTAAATCAACCAAAAATCCTATGGCAACTATTCATCCTCCCAGTGACGTCTTCAACTCCAAGCCTTCTCCTGCAATAGCAGATTTCTCCTCCAGGGGACCAAGCACGTTCGTACCAGAGATCCTCAAGCCTGATATTACTGCTCCTGGGGTGAATATTTTGGCTGCATATTCACCTGCTGCTGCCCTTACAGGATTTTATCTTGACAATCGTCGAAACTTTTCTTATAACCTTCTGTCTGGAACTTCTATGTCTTGTCCTCATGTTTCTGGAGTTGTCAGCCTTCTCAAAACTTTTCATCCTGATTGGAGTCCTGCTGCTATTAAATCTGCTATCATGACAACATCAAAGACAAGGGACAGTACTGGCCATCCAATGCTTGCTGCGAGTGATGCAAAGGGCACAATGAAGAAGGCAACTCCATTTGAGTTTGGGTCAGGTCACATTAGGCCAAACCAAGCCATTGACCCTGGCTTGGTCTATGACTTAACCTTAAAGGACTACCTTAATCTTATGTGTGGCCTTAACTACAACGCCACAAATTTAAGATTGTTCTATGATGCTCCTTACAAGTGTCCTTATTCCTACAATATTTTCAACTTCAGTTACCCTTCAATTACCATCCCTGTCCTCTATTCCTCAGTCAATGTGAGCAGGTCCCTCAAGAACGTTGGCTTGCCAGGCACGTACGTGGCTCGAGTGCTCTCCCCTCCGGGTCTGACCATTAATGTGGAACCTAAGACCTTGACGTTCGACAAGGTTGGTGAAGAGAGAAGTTTTACTTTGACAATTGAAGTTATAAGGCATGGTCCTGAGACTACATTCGGAAGGACAATTTGGTCCGATGGAAAGCATTTTGTGAGAAGTCCTATAACTGTTGGTGGTGTTCTGGTTTAG	1974	0.4686	MSQTDVNGVARGGSCFKKARFGADVIIANIDGGSWPESQSFSDEGMGPIPSRWKGACDEQVEVLYYECRKLIGARFFNKGYMSDARGAASSSEGLKTELHTPRDYDGHGTHTLSTAAGCFVHGVNIFDRLANGTASGGSPMARVAAYKVCWPDMYDQSSLSCHDSDILAAFDMAIHDGVHVISVSLGSNFPQSYLNGINVVCSGGNAGPFPQSVINVAPWVFTVAASTIDKDFQARVQLRDGQIFQGASLSKALPQDRFYPLIAGAEARRSNSTIDDANLCLIGTIDPKKVKGKILVCLTSDDDDGYSVKMEKGYEALQAGAAAMILCSSSKKDATRIYMHLLPAAHIKYKDTLSLLAYLKSTKNPMATIHPPSDVFNSKPSPAIADFSSRGPSTFVPEILKPDITAPGVNILAAYSPAAALTGFYLDNRRNFSYNLLSGTSMSCPHVSGVVSLLKTFHPDWSPAAIKSAIMTTSKTRDSTGHPMLAASDAKGTMKKATPFEFGSGHIRPNQAIDPGLVYDLTLKDYLNLMCGLNYNATNLRLFYDAPYKCPYSYNIFNFSYPSITIPVLYSSVNVSRSLKNVGLPGTYVARVLSPPGLTINVEPKTLTFDKVGEERSFTLTIEVIRHGPETTFGRTIWSDGKHFVRSPITVGGVLV	657

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral3760g00005	657	CDD	Peptidases_S8_3	10	475	IPR034197	-
	Pral3760g00005	657	Gene3D	-	531	654	-	-
	Pral3760g00005	657	PRINTS	Subtilisin serine protease family (S8) signature	439	455	IPR015500	-
	Pral3760g00005	657	PRINTS	Subtilisin serine protease family (S8) signature	104	117	IPR015500	-
	Pral3760g00005	657	PRINTS	Subtilisin serine protease family (S8) signature	22	41	IPR015500	-
	Pral3760g00005	657	SUPERFAMILY	Subtilisin-like	22	520	IPR036852	GO:0004252\|GO:0006508
	Pral3760g00005	657	Pfam	PA domain	281	355	IPR003137	-
	Pral3760g00005	657	CDD	PA_subtilisin_like	237	370	-	-
	Pral3760g00005	657	Gene3D	Peptidase S8/S53 domain	24	527	IPR036852	GO:0004252\|GO:0006508
	Pral3760g00005	657	Gene3D	-	230	377	-	-
	Pral3760g00005	657	FunFam	subtilisin-like protease SBT1.5	230	377	-	-
	Pral3760g00005	657	Pfam	Subtilase family	24	478	IPR000209	GO:0006508\|GO:0008236
	Pral3760g00005	657	ProSiteProfiles	Serine proteases, subtilase domain profile.	1	514	-	-
	Pral3760g00005	657	ProSitePatterns	Serine proteases, subtilase family, serine active site.	440	450	IPR023828	-
	Pral3760g00005	657	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	19	652	IPR045051	-
	Pral3760g00005	657	Pfam	Fibronectin type-III domain	560	652	IPR041469	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral3760g00005	Pral-Chr3760	71398	75561	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral3760g00005	7	652	Subtilisin-like Serine Gene Family	AT5G59810	51.964	0.0	642

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral3760g00005	-		-	pcin:129286039	931.784