Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3758g00017 ATGGAGGAGGATGGGATTCAAGGGCAAGCGCGTAAATTCCCAAGAATTGAAAACGGGAGTGCAAGGAACGATTCCTCCAACAACAACAAGATAGGTTCCAATATTAACGAAGAGAATGGAGACCTCAGAAAAAGAAGTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCAACGATGGAAGTAGCAACCGATTTCACGGTTGGCACCACCAGTCTTCTCGAATCATTAGGGTTTCTCGTGCCTCCGGCGGGAAAGATCGGCACAGCAAGGTCATGACTTCGAAGGGTTTAAGAGACCGAAGGGTTCGCCTCTCTGTGACCACAGCGATTCAATTCTACGACCTTCAAGATCGACTGGGTTATGACCAACCTAGCAAAGCCGTGGAATGGTTGATCAAAGCTGCTTCTGATGCAATTTCTGAGCTTCCTTCTCTGAAAAATACGTTCCCCGAGACCCCAAAGCAACCCAGCGATGAGAAGAGGGGAGGTGAGAAATGTATCGATTCAGCTGACGCAGAAGTAGATGGTGAAGCGAGTTTCCACCAGCAGAATCAGAATCAAAGTCAGAATCTTTCCTTGTCGAAGTCCGCTTGTAGCAGCACGTCGGAGACAAGCAAAGGTTCCGGCTTGTCTCTCTCCAGGTCGGAGATTCGAGTCAAGGCGCGTGAGAGGGCGAGGGAGAGAGCGGCGAAGGAGAAGGAGAAAGAGAATGATGAATCTTGCAATAACATTGCTCATCCCCAGAATAACAATGTCATCTCCATGGCTCAAACTTCTTTCACTGAGCTTCTCACTGGTGGGATAAATACTAGCGTTCCTGCGACTACTAGTCCCACCGGGTCGGGTCAGCAGAATCATAATCGGAGTGATGAGGCTGATCTGTTCAACAAAGGAGCTAGACATCAATGGAGTATGGCGCCTATGGACTACTTCGGGGCAGGGCTTCTGGGAGGTTCGTCGTCTTCAAGAACCCAGCATCATCAGTCTTCTGCGTTTGCAGGGCAGATCCAATTGGGGAACAATCTTCCTCAGACAATGTCGGTTGTACCATTCGGAGTCCAGAGTGAAAACCACTCAGATCAGCTTCAGCAATTCTCGTTCATCCCCGACCATCTTATGCCGGCGGTGGTCACGTCGTCGCAGACCCCAAGCGGCGGGGGGAGCGAGTACAATCTCAACTTTACCATCTCTTCGTCTTCTAATTCCGGCGGCCTTGCTGGTTTCAGTAGTAGGGGGACCCTTCAGTCCAATTCTCCGTCTCTTCTGCCTCACCATCTGCAGAGGTTCTCACCTTTAGACGGATCGTCCAACTTACCTCTCTTCATCGGAGCAAATGCAGCTCCAGCCATGGAGAATCACCACCACCACCACCATCACCAGTTCTCACCCGAATTAGACGGCCGCTTGCAACTCTTCTACGGCGACGGAAACCGGCATTCAGACCAGAAGGGAAAGGGGAAGAACTGA 1473 0.5119 MEEDGIQGQARKFPRIENGSARNDSSNNNKIGSNINEENGDLRKRSGGGGGGGGGGGGGNDGSSNRFHGWHHQSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKAASDAISELPSLKNTFPETPKQPSDEKRGGEKCIDSADAEVDGEASFHQQNQNQSQNLSLSKSACSSTSETSKGSGLSLSRSEIRVKARERARERAAKEKEKENDESCNNIAHPQNNNVISMAQTSFTELLTGGINTSVPATTSPTGSGQQNHNRSDEADLFNKGARHQWSMAPMDYFGAGLLGGSSSSRTQHHQSSAFAGQIQLGNNLPQTMSVVPFGVQSENHSDQLQQFSFIPDHLMPAVVTSSQTPSGGGSEYNLNFTISSSSNSGGLAGFSSRGTLQSNSPSLLPHHLQRFSPLDGSSNLPLFIGANAAPAMENHHHHHHHQFSPELDGRLQLFYGDGNRHSDQKGKGKN 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3758g00017 490 MobiDBLite consensus disorder prediction 155 177 - -
Pral3758g00017 490 MobiDBLite consensus disorder prediction 273 291 - -
Pral3758g00017 490 MobiDBLite consensus disorder prediction 19 36 - -
Pral3758g00017 490 MobiDBLite consensus disorder prediction 146 249 - -
Pral3758g00017 490 MobiDBLite consensus disorder prediction 273 292 - -
Pral3758g00017 490 ProSiteProfiles TCP domain profile. 86 144 IPR017887 -
Pral3758g00017 490 MobiDBLite consensus disorder prediction 1 75 - -
Pral3758g00017 490 MobiDBLite consensus disorder prediction 218 243 - -
Pral3758g00017 490 Coils Coil 221 241 - -
Pral3758g00017 490 ProSiteProfiles R domain profile. 217 235 IPR017888 -
Pral3758g00017 490 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 21 401 IPR005333 GO:0003700
Pral3758g00017 490 MobiDBLite consensus disorder prediction 180 214 - -
Pral3758g00017 490 Pfam TCP family transcription factor 85 237 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3758g00017 Pral-Chr3758 108062 116191 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3758g00017 65 490 TCP Transcription Factor Family AT4G18390 45.333 1.21e-82 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pral3758g00017 TCP 1.6e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3758g00017 - - tcc:18596471 468.388