Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3755g00024 ATGAAACCACCCCTCAATCCATCCTCCGTGTTCTTCCTTTTGGTTCCTTTGGTGATCTCTGTCCATATTTCATCTTCTATTGGTGTGGATGATGATTGGTATACAAACTGCTTAAGTACCACTTTTAGCTGCGGAAGCATACAAGACCTCACTTATCCATTCTGGGGAGGAGAGAGAGCAAATTATTGTGGTCTTCCTGATTTCAACCTCACTTGCGAAGCCAATATCCCAAAAATTACCATACGGTCCCTCAAATACCGTATTCTTCGTTTGGAATGGACTACACAGACTCTTGTAGTGGCTAGGGATGATTATTTTGACACTATTTGTCCAAATGATTACAAAAACAACACATTTGATCAAACATCGTTCAAGTATGTAGACGATGGGCTTACTAATGTGACCTTTCTCTACGATTGTGGTTCTTATAGTTCTCCCCCATTTCCATCAAATCCTTTCGATGCAAAGTGCAAGGAAGCTGATGATCATACAAATATAACAGTCTACTACCTTCTAGGACCATGGTATATAAGTGATTGCAAAAGTGTTATTATGCCGATATATGAAGCGAACCTTGGTCGAGTTCAAGCTGCTGTACAGGATGTATTACGAGATGGGTTTGGGTTGCAATGGATGGTAAATACCGAGGATTGCAACACATGCTCTCAATCTGGTGGCCAGTGCGGCTATGATGGACAATTCTCCTGCTTTTGTAAAGATGGACCCCAAAAAACTTCATGTCCTGGTAAAACGTCAGGATCAACTGGGAAGCTAGGTTCGCGAGTTGCTATAGGCATTTCAACAGGAGTTGGTGGACTTGCTCTAATCTCGATTTTGATTATTTATATTTGCAAGAAGCGTTTCGGAACAGAAAATGGGAAATTATTCACAGAGAGAAGAGCATATCATGATCACAATGTTAAATCCTTCATGAGAAACTATGGCTCTTTGGCGCCAAAGAAATATGGTTATGCAGAAGTGAAAAGAATGACAAAATCATTTTCAAACAAATTGGGCGAAGGAGGGTATGGTGTTGTATACAAAGCCAGCCTACCTGATGGTTGTCCAGTGGCAGTTAAAGTAATAAGGGAATCTAAAGGAAGTGGAGAAGAATTTATAAATGAAGTTGCGAGCATCAGCAGAACCTCCCATGTCAACATAGTCACTCTCCTGGGATTTTGTCATGAAAGGAACAAAAGAGTGTTAATCTACGAATACCTGTCAAACGGTTCCTTGGATAATTTCATCTATCAGAGAGGGTCTTCAAACGCTCTCTGTGCTTTGGAGTGGAAGTTATTGTACCAGGTTGCTATTGGCATTGCTCGTGGACTGGAGTACTTGCATCGGGGTTGTAACACAAGAATTTTGCATCTTGATATCAAACCCCAAAACATTCTCTTGGATGAAGAATTTTCCCCAAAAATATCTGATTTTGGATTGGCTAAATTATGTCAAAAGAAGGAGAGTATTGTGTCAATACTAGGCACAAGAGGAACAATAGGGTTCATTGCACCAGAAATATTCAGTAGAGCATTTGGCGGTGTTTCTTACAAAGCAGATGTTTATAGCTATGGCATGTTGGTCCTTGAAATGGTCGGAGGAAGGAAGAACTACGACAGTGGAGGATCACAAGCTGATGAGCAGTATTTTCCGGATTGGATTTATAAGGATCTTGAACATGGTAAGCATCCAGCTAGTTCTTTAGTAATCACAGAGGAAGATGATGAGGTGGTAAAGAAGATGACTCTAGTGAGTCTATGGTGTGTTCAGACAAATCCATCAGATAGACCAGCTATGAGCAAAGTGGTAGAAATGTTAGAAGGACCCCTTCAATCCTTAACGGTTCCTCCAAAGCCATCCCTTGAATATCCTACAAAATCATCAGCAGTTATACAATTGTCAAATGCATCTTCTGAAGACATGATTCAGACAGTTTCAATAAGCAGTTGA 1950 0.4051 MKPPLNPSSVFFLLVPLVISVHISSSIGVDDDWYTNCLSTTFSCGSIQDLTYPFWGGERANYCGLPDFNLTCEANIPKITIRSLKYRILRLEWTTQTLVVARDDYFDTICPNDYKNNTFDQTSFKYVDDGLTNVTFLYDCGSYSSPPFPSNPFDAKCKEADDHTNITVYYLLGPWYISDCKSVIMPIYEANLGRVQAAVQDVLRDGFGLQWMVNTEDCNTCSQSGGQCGYDGQFSCFCKDGPQKTSCPGKTSGSTGKLGSRVAIGISTGVGGLALISILIIYICKKRFGTENGKLFTERRAYHDHNVKSFMRNYGSLAPKKYGYAEVKRMTKSFSNKLGEGGYGVVYKASLPDGCPVAVKVIRESKGSGEEFINEVASISRTSHVNIVTLLGFCHERNKRVLIYEYLSNGSLDNFIYQRGSSNALCALEWKLLYQVAIGIARGLEYLHRGCNTRILHLDIKPQNILLDEEFSPKISDFGLAKLCQKKESIVSILGTRGTIGFIAPEIFSRAFGGVSYKADVYSYGMLVLEMVGGRKNYDSGGSQADEQYFPDWIYKDLEHGKHPASSLVITEEDDEVVKKMTLVSLWCVQTNPSDRPAMSKVVEMLEGPLQSLTVPPKPSLEYPTKSSAVIQLSNASSEDMIQTVSISS 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3755g00024 649 FunFam serine/threonine-protein kinase PBS1-like 301 406 - -
Pral3755g00024 649 FunFam PR5-like receptor kinase 407 618 - -
Pral3755g00024 649 SUPERFAMILY Protein kinase-like (PK-like) 312 606 IPR011009 -
Pral3755g00024 649 Pfam Wall-associated receptor kinase C-terminal 179 241 IPR032872 -
Pral3755g00024 649 ProSiteProfiles Protein kinase domain profile. 332 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3755g00024 649 Gene3D Transferase(Phosphotransferase) domain 1 407 615 - -
Pral3755g00024 649 ProSitePatterns Protein kinases ATP-binding region signature. 338 360 IPR017441 GO:0005524
Pral3755g00024 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Pral3755g00024 649 SMART serkin_6 332 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3755g00024 649 Pfam Wall-associated receptor kinase galacturonan-binding 39 101 IPR025287 GO:0030247
Pral3755g00024 649 PANTHER RUST RESISTANCE KINASE LR10-RELATED 304 626 IPR045874 GO:0004672
Pral3755g00024 649 Pfam Protein kinase domain 335 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3755g00024 649 Gene3D Phosphorylase Kinase; domain 1 306 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3755g00024 Pral-Chr3755 308914 311602 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3755g00024 9 649 Receptor kinase-like Gene Family AT1G66910 41.802 2.37e-162 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral3755g00024 Pkinase 5.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3755g00024 - - pcin:129293521 939.488