Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3755g00019 ATGAGAAACTATGGCTCTTTGGCACCAAGGCAATATAGTTACTCAGAAGTGAAAAGAATGACAAAATCATTTTCAGACAAATTGGGCGAAGGAGGGTATGGTGTTGTATACAAAGCCAGCCTACCTGATGGTCGTCCAGCGGCAGTTAAAGTAATAAGGGAATCTAAAGGAAGTGGAGAAGAATTTATAAATGAAGTTGCAAGCATCAGCAGAACCTCCCACGTCAACATAGTCACTCTCCTGGGATTTTGTTATGAAAGGAACAAAAGAGTACTAATCTATGAATACCTGTCAAACTGTTCCTTGGATAATTTCATCTATCAAAGAGGATCTCCAAATGCTTTCTGTACTTTGGAGTGGAAGGTATTGTACCAAGTTGCTATTGGCATTGCTCGTGGACTGGAGTACTTGCATAGGGGTTGTAACACGAGAATTTTGCATCTTGATATCAAACCCCAAAACATTCTCTTAGATAAAAAATTTTTTCCAAAAATATCTGATTTTGGATTGGCTAAATTATGTCAAAAGAAGGAGAGTATTGTGTCAATACTAGGCACAAGAGGAACAATAGGGTTCATTGCACCAGAAATATTCAGTAGAGCATTTGGTGGTGTTTCCCACAAAGCACATGTTTATAGCTATGGCATGTTGGTCCTTGAAATGGTTGGAGGAAGGAAGAACTACGACAGTGGAGGATCACAAACTGATGAGCAGTATTTTCCAGATTGGATTTATAAGGATCTTGAACATGGTAAGCATCCGGCTAGTTCTTTAGTAATCACAGAGGAAGATGATGAAGTGGTAAGGAAGATGACTTTAGTGAGTCTATGGTGTGTTCAAACAAATCCATCAGATAGACCAGCTATGAGTAAAGTGGTAGAAATGTTAGAAGGACCCCTTCAATCCTTAATGGTTCCTCCAAAGCCATCCCTTGAATATCCTACAAAATTATCAGCAGTTATACAATTGTCAAATGCATCTTCCGAAGACATGATTCATACAGTTTCAATAAGCAGTTGA 1020 0.3873 MRNYGSLAPRQYSYSEVKRMTKSFSDKLGEGGYGVVYKASLPDGRPAAVKVIRESKGSGEEFINEVASISRTSHVNIVTLLGFCYERNKRVLIYEYLSNCSLDNFIYQRGSPNAFCTLEWKVLYQVAIGIARGLEYLHRGCNTRILHLDIKPQNILLDKKFFPKISDFGLAKLCQKKESIVSILGTRGTIGFIAPEIFSRAFGGVSHKAHVYSYGMLVLEMVGGRKNYDSGGSQTDEQYFPDWIYKDLEHGKHPASSLVITEEDDEVVRKMTLVSLWCVQTNPSDRPAMSKVVEMLEGPLQSLMVPPKPSLEYPTKLSAVIQLSNASSEDMIHTVSISS 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3755g00019 339 FunFam serine/threonine-protein kinase PBS1-like 2 96 - -
Pral3755g00019 339 SMART serkin_6 22 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3755g00019 339 PIRSF ILK 8 305 - -
Pral3755g00019 339 Gene3D Transferase(Phosphotransferase) domain 1 97 305 - -
Pral3755g00019 339 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Pral3755g00019 339 Gene3D Phosphorylase Kinase; domain 1 3 96 - -
Pral3755g00019 339 PANTHER RUST RESISTANCE KINASE LR10-RELATED 10 316 IPR045874 GO:0004672
Pral3755g00019 339 Pfam Protein kinase domain 25 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3755g00019 339 SUPERFAMILY Protein kinase-like (PK-like) 7 296 IPR011009 -
Pral3755g00019 339 ProSitePatterns Protein kinases ATP-binding region signature. 28 50 IPR017441 GO:0005524
Pral3755g00019 339 FunFam PR5-like receptor kinase 97 308 - -
Pral3755g00019 339 ProSiteProfiles Protein kinase domain profile. 22 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3755g00019 Pral-Chr3755 276244 287921 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3755g00019 2 339 Receptor kinase-like Gene Family AT1G66910 55.977 8.95e-131 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral3755g00019 Pkinase 7.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3755g00019 - - pcin:129293521 580.482