Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3754g00001 ATGTCCCCCCACAATGTGGTGGTTCTGGACAACGGTGGAGGCCTAATCAAAGCTGGCCTCGGTGGAGAGTGTGACCCCTCTGTTGTTGTTCCCAACTGCCTTTACCGACCTCCGTCCTCCAAGAAATGGCTCCAACCAAACCCCCTCAACCCCACCACCACCACCACCTCCTCTATGGAACCATCCTCAGTCAGTGAAGTGGACCTCACCTCGGCTGCAGTTCGACGGCCCATGGACAGAGGGTATATGATAAATCCTGAACTTCAACGAGAGATATGGGCTCACCTCTTCTCTTCCATCCTCCACATAAACCCATCAAACTCTTCACTCCTCCTCACTGAGCCCCTCTTCGCCCTTCCTTCCATTCAGCGATCAATGGATGAGCTTGTCTTTGAGGATTTCAACTTTAAGTCTCTTTATGTGGCTGACTCACCCTCTTTGGTTCATCTCTATGAGGCAAGTCGTAGGCCTGAAGGTCTTGTCTCTAGAGCGCAGTGCAGCCTTGTTGTGGATTGCGGGTTTTCGTTCACACACGCCTCACCGGTGTTTCAGAACTTCACGTTGAATTATGCTGTGAAGAGAATCGATTTGGGTGGCAAAGCATTGACCAATTATCTGAAGGAGTTGGTTTCTTTTAGGGCTGTTAATGTCATGGAGGAAACTTTTATTATGGATGATGTTAAGGAGAAGCTCTGCTTTGTTTCCCTTGATGTTCCCCGGGATCTCCAGATTGCAAGGAAACCTGGAAAAGAAAATCTCTTTAGATGCACATATGTGCTTCCGGATGGTGTTACACACACAAAAGGCTTTGTTAAATATCCAGATCAAGTACACAGATATCTTACTCTGGCTGATGATTCTCCTTTGCCTCCAAAAGAAAAAAAGGAGGATATGAATCTTCAGGAGTTTGACTTGACAAATGAACGCTTTCTTGTCCCAGAAATGATCTTCCATCCTGCTGATTTAGGAATGAATGAGGCTGGAATAGCAGAGTGCATTGTACGAGCTATTAACTGCTGCCATCCACAACTCCACCCTGTACTCTATGAGAGCATCATTTTAACTGGCGGAAGCACCTTATTTCCTCAATTTGCTGAGAGATTAGAGATGGAGCTGCGGCCTCTAGTTCCTGATGACTACCATGTGAAGATAACTCAACAACAAGATCCCATATTAGGTGTTTGGCGTGGAGGATCATTGTTGGCATCAAGTCCAGATTTTGAAGCTATGTGCGTGACCAAGTCTGAGTATGAGGAGCTTGGATCTGCTAGATGTCGCAAGAGATTCTTTCATTGA 1296 0.4637 MSPHNVVVLDNGGGLIKAGLGGECDPSVVVPNCLYRPPSSKKWLQPNPLNPTTTTTSSMEPSSVSEVDLTSAAVRRPMDRGYMINPELQREIWAHLFSSILHINPSNSSLLLTEPLFALPSIQRSMDELVFEDFNFKSLYVADSPSLVHLYEASRRPEGLVSRAQCSLVVDCGFSFTHASPVFQNFTLNYAVKRIDLGGKALTNYLKELVSFRAVNVMEETFIMDDVKEKLCFVSLDVPRDLQIARKPGKENLFRCTYVLPDGVTHTKGFVKYPDQVHRYLTLADDSPLPPKEKKEDMNLQEFDLTNERFLVPEMIFHPADLGMNEAGIAECIVRAINCCHPQLHPVLYESIILTGGSTLFPQFAERLEMELRPLVPDDYHVKITQQQDPILGVWRGGSLLASSPDFEAMCVTKSEYEELGSARCRKRFFH 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3754g00001 431 MobiDBLite consensus disorder prediction 44 67 - -
Pral3754g00001 431 Gene3D - 7 422 - -
Pral3754g00001 431 Pfam Actin 4 430 IPR004000 -
Pral3754g00001 431 CDD NBD_sugar-kinase_HSP70_actin 91 209 - -
Pral3754g00001 431 FunFam Actin-related protein 6 142 202 - -
Pral3754g00001 431 Gene3D Actin; Chain A, domain 2 34 77 - -
Pral3754g00001 431 SUPERFAMILY Actin-like ATPase domain 165 430 IPR043129 -
Pral3754g00001 431 FunFam Putative actin-related protein 5 394 422 - -
Pral3754g00001 431 Gene3D - 142 396 - -
Pral3754g00001 431 SUPERFAMILY Actin-like ATPase domain 2 148 IPR043129 -
Pral3754g00001 431 FunFam Actin-related protein 6 203 264 - -
Pral3754g00001 431 FunFam ARP5 actin-related protein 5 homolog 327 393 - -
Pral3754g00001 431 SMART actin_3 4 430 IPR004000 -
Pral3754g00001 431 Gene3D Actin; Chain A, domain 4 203 328 - -
Pral3754g00001 431 PANTHER ACTIN 7 422 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3754g00001 Pral-Chr3754 13689 17192 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3754g00001 7 430 Cytoskeleton Gene Families AT1G49240 27.700 2.54e-56 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3754g00001 K11662 - csv:101218682 686.411