Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3753g00007 ATGCGGATGAGCTGTAATGGATGTCGCGTTCTCAGAAAAGGTTGCAGTGAGAATTGTAGTATCAGACCTTGCTTGCAGTGGATCAAATCCCCAGAATCTCAAGCTAACGCCACTGTGTTTCTTGCTAAGTTCTATGGCCGTGCGGGCCTCTTGAACCTCATCAACGCTGGCCCTCAACACCTTCGTCCTGCTATTTTTCGATCTCTGCTTTACGAAGCATGCGGGCGGATACTTAACCCGATTTATGGGTCCGTGGGTCTGTTATGGTCCGGGAACTGGCAGCGTTGTCAGGCCGCCGTGGAGGCAGTGCTGAAGGGTAATCCGATCACCCCGATCAACTCGGAAGCCGCCGCGAGTGGGCAGGGTCCACCGCTGAAGCCTTACGATATACGTCATGTGTGTAAGGACAAGGACTCGGTCGGGTCGAACGATGCCCAACGAGTCAAATCTCGGTCACGGTTCAAGCGATCAGCCGGGAAGACCAAGAAGCCGAACAAGGGGACGGAGTTGAAGTCCGCTGAACCGGAAGAACCGCGCAGTGGATGCACTGTGTGTTGTGCGGCCGTTGATGAAGTGGCGAACCGGTCCGCGAGTCACGAATCGTCTCTGAGTCACCAGTCGGAGGAGGCGCCGCCGAACGTGGAGACGGCGGCGGAAGAGGATAGCAAAGAGAGCGACAGCATGGTGTCGGTAGAGACTGCCGAGACTTCCATGCTCTTCCGGGACGAACCGGAATCAGCACGCAAACAGAGCAACGGAGCCGACGAAGCCGGTGGGGCGGACGTCGGGCTAGAGCTGACGCTAGGGTTCAAACCGGCGCTACGTGAGACTCACGTGATGCCGGTCAAGAAAAGAAAGATAGATTTTCAACTTCAAGGCTCAGGTGGTGACTCGGCTAACAAGAAAGTAGCTGGCATGAAGCTGGGGCTCGAATGCTCGGCTTGA 945 0.5619 MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLLNLINAGPQHLRPAIFRSLLYEACGRILNPIYGSVGLLWSGNWQRCQAAVEAVLKGNPITPINSEAAASGQGPPLKPYDIRHVCKDKDSVGSNDAQRVKSRSRFKRSAGKTKKPNKGTELKSAEPEEPRSGCTVCCAAVDEVANRSASHESSLSHQSEEAPPNVETAAEEDSKESDSMVSVETAETSMLFRDEPESARKQSNGADEAGGADVGLELTLGFKPALRETHVMPVKKRKIDFQLQGSGGDSANKKVAGMKLGLECSA 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3753g00007 314 MobiDBLite consensus disorder prediction 162 176 - -
Pral3753g00007 314 MobiDBLite consensus disorder prediction 136 151 - -
Pral3753g00007 314 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Pral3753g00007 314 MobiDBLite consensus disorder prediction 196 259 - -
Pral3753g00007 314 MobiDBLite consensus disorder prediction 196 211 - -
Pral3753g00007 314 MobiDBLite consensus disorder prediction 136 179 - -
Pral3753g00007 314 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 268 - -
Pral3753g00007 314 PIRSF AS2 1 306 IPR017414 -
Pral3753g00007 314 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3753g00007 Pral-Chr3753 24627 26211 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3753g00007 1 287 AS2 family AT3G02550 55.401 2.24e-101 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral3753g00007 LOB 6.9e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3753g00007 - - qsa:O6P43_005610 390.963