Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3748g00002 ATGTCCAAATTTGAGGAACAGCTGGCACTTCCAGCTCATGTATGGAGTTGGGATAATAAGATGAGAGCAACGAAGAATGAGAAAGCAGAGTGGATTCGCCACCCATGGAAGAAAACACGCGTTTGGTTAGGCACGTCCGTGGCTACGGTGGCGGCGGGGCTGGCCTACGACGGTGCTGCCTGTTCCCTTCGCAACCCAAAGGCCAATACCAACCTTCCTCCGTCCCCGGTGGCTGCAACCTCTGAATATGGCTCCGGTGTTCTCAAGGATCATCCTCCGCCTTCGCCTGCGGCTCCCATTGCGACTGGTGTAATTGGATTGGGAGGGATAAACACTTTTGCTAATTAA 348 0.5345 MSKFEEQLALPAHVWSWDNKMRATKNEKAEWIRHPWKKTRVWLGTSVATVAAGLAYDGAACSLRNPKANTNLPPSPVAATSEYGSGVLKDHPPPSPAAPIATGVIGLGGINTFAN 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3748g00002 115 Gene3D AP2/ERF domain 12 74 IPR036955 GO:0003700|GO:0006355
Pral3748g00002 115 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 32 80 - -
Pral3748g00002 115 ProSiteProfiles AP2/ERF domain profile. 1 73 IPR001471 GO:0003700|GO:0006355
Pral3748g00002 115 SMART rav1_2 24 79 IPR001471 GO:0003700|GO:0006355
Pral3748g00002 115 SUPERFAMILY DNA-binding domain 31 74 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3748g00002 Pral-Chr3748 51310 59243 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3748g00002 32 78 AP2-EREBP Transcription Factor Family AT1G28360 63.830 6.00e-11 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3748g00002 - K09286 aip:107624305 73.1738