Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3745g00010 ATGATATGGTCTGCACCTCAAGACCGATGCGATAAGTACTTTCAATGTGGTCCATATGGTATATGTGATTCCAATTCTTTTCCTGTATGTAAATGCTTTCAAAGTTTCAGCCCAAAAAATCAGAATGAATGGAATTTGAGAGTTTTTACCAATGGCTGTGCGAGGAGCACAGGTTTGGATTGTCCGACAGACAAGTTCTTGCAGCTGCAGCATGTGGAGTTACCTGAATCAGTGAATGCGTTTGTGAACAATAGCATGTCCCTTTCAGAATGTGAGGACATGTGCAGGAAAAATTGTTCTTGTAGTGCTTATGCTAATGTGAACGTCACTAATGGAGGAACAGGTTGTGTTATATGGACTGAGGACCCGAAAGACATGAGGCAGTTTTCTGAAGGTGGCCAAGATGTCTTTGTCAGAGTTGCTGCTTCTGTTGTTACTGACCCAGGATCTGCAAGTGGCAAGAAGAAAAATACAGGCATGATTATAGGCATTACAATGGGAGCAATTATCATAGTTTTGGGTTTGATCATGTTTCTTTTGTGGAAGAGAAAGTCAAATATACTAAAACGAAGAGCAGAGCAGATAGGTGGTTTTGGGACAAGTCAAGATATACTTTTAGTCTCAAGAAATACAGAAAATTCAGGTGATTCGAACATGGATGATCTAGAGTTGCCATTGTTCGATTTTAATACCATAACAATGGCTACAGACAACTTCTCAGGGGCAAATAAACTTGGAGAAGGAGGCTTTGGTAGTGTTTACAGGGGTAGGTTGTTTGAAGGGCATGATATTGCTGTGAAGAGGTTATCAAAAAGCTCGGGGCAAGGGATCGAAGAATTCAAGAATGAAGTCAAGTTGATTGTGAAGCTTCAACATCGAAACCTTGTACGAATGTTTGGTTGCTGCATTGAGAACGAGGAAAAGATGTTAGTTTATGAATATATGGAAAATAAAAGCCTTGATTTTTTCTTGTTTGACACAGAAAAATGTTCCTTATTGGACTGGCAATTACGCTTCGACATTATATGTGGAATAGCAAGAGGACTTCTTTATCTTCACCAAGACTCTAGACTTAGAATTATTCATAGGGATCTCAAGGCAAGTAACATTCTACTTGACAAGGAGATGAATCCAAAGATATCAGATTTTGGGATGGCTAGAATCTTTGGTAATGATCAAACAGTAGCGAAAACAATAAGAGTTGTTGGAACATATGGCTATATGTCTCCAGAATATGCATTGGATGGACTTTTTTCTATAAAATCCGATGTTTTTAGCTTTGGAGTTCTTGTGTTAGAAATAATAAGTGGCAAGAAGAACAGAGGATTTTATTACTCAGACGAGTTAAACCTCCTTGGACATTCATGGAAGCTATGGAATGAAGGGCGCGCACTGGAACTGGTGGATCCATCATTTGGTAATTCATATTCATCATCTGAAGCATTAAGATGCATAAAGGTTGGTTTAATCTGTGTTCAAGAAAGACCAGAAGATCGACCAACAATGTCTTCTGTAGTATTAATGTTAAGTAGTGAAAATGCATCAATACCACAGCCTAAGAACCCAGGTTTTGTTGCAAGGACTCATACTGATACTAGTTCTTCAACCCAACAAGAAGAATCATACTCTGTGAATCAAGTTACAGTCACAGTAGTTGATGCCAGGTAG 1668 0.3879 MIWSAPQDRCDKYFQCGPYGICDSNSFPVCKCFQSFSPKNQNEWNLRVFTNGCARSTGLDCPTDKFLQLQHVELPESVNAFVNNSMSLSECEDMCRKNCSCSAYANVNVTNGGTGCVIWTEDPKDMRQFSEGGQDVFVRVAASVVTDPGSASGKKKNTGMIIGITMGAIIIVLGLIMFLLWKRKSNILKRRAEQIGGFGTSQDILLVSRNTENSGDSNMDDLELPLFDFNTITMATDNFSGANKLGEGGFGSVYRGRLFEGHDIAVKRLSKSSGQGIEEFKNEVKLIVKLQHRNLVRMFGCCIENEEKMLVYEYMENKSLDFFLFDTEKCSLLDWQLRFDIICGIARGLLYLHQDSRLRIIHRDLKASNILLDKEMNPKISDFGMARIFGNDQTVAKTIRVVGTYGYMSPEYALDGLFSIKSDVFSFGVLVLEIISGKKNRGFYYSDELNLLGHSWKLWNEGRALELVDPSFGNSYSSSEALRCIKVGLICVQERPEDRPTMSSVVLMLSSENASIPQPKNPGFVARTHTDTSSSTQQEESYSVNQVTVTVVDAR 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3745g00010 555 ProSitePatterns Serine/Threonine protein kinases active-site signature. 360 372 IPR008271 GO:0004672|GO:0006468
Pral3745g00010 555 CDD PAN_AP_plant 59 141 - -
Pral3745g00010 555 Pfam PAN-like domain 62 125 IPR003609 -
Pral3745g00010 555 SUPERFAMILY Protein kinase-like (PK-like) 217 509 IPR011009 -
Pral3745g00010 555 ProSiteProfiles PAN/Apple domain profile. 61 141 IPR003609 -
Pral3745g00010 555 Pfam S-locus glycoprotein domain 2 40 IPR000858 GO:0048544
Pral3745g00010 555 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 205 314 - -
Pral3745g00010 555 MobiDBLite consensus disorder prediction 517 544 - -
Pral3745g00010 555 Pfam Domain of unknown function (DUF3403) 511 555 IPR021820 GO:0004674
Pral3745g00010 555 Gene3D Phosphorylase Kinase; domain 1 214 314 - -
Pral3745g00010 555 Gene3D Transferase(Phosphotransferase) domain 1 315 521 - -
Pral3745g00010 555 Pfam Protein tyrosine and serine/threonine kinase 243 507 IPR001245 GO:0004672|GO:0006468
Pral3745g00010 555 SMART ntp_6 61 140 IPR003609 -
Pral3745g00010 555 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 315 517 - -
Pral3745g00010 555 CDD STKc_IRAK 245 509 - -
Pral3745g00010 555 ProSitePatterns Protein kinases ATP-binding region signature. 245 267 IPR017441 GO:0005524
Pral3745g00010 555 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 10 534 - -
Pral3745g00010 555 MobiDBLite consensus disorder prediction 525 544 - -
Pral3745g00010 555 SMART serkin_6 239 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3745g00010 555 ProSiteProfiles Protein kinase domain profile. 239 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3745g00010 Pral-Chr3745 454863 458761 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3745g00010 147 529 Receptor kinase-like Gene Family AT4G23190 52.442 6.20e-144 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3745g00010 PK_Tyr_Ser-Thr 4.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3745g00010 - - aip:107621503 801.586