Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3744g00020 ATGGGGGTCAGAGTTTATACAGAAGTTTTAGGTGTTTTCCTCCTATGTGCATGCTATTATTCATTTTTAGCCTCTGGCTTAGACACTCTAACAGCATCTAAGCGAATGAAGGATCCAGATATTCTGACCTCTAATAGCACCAATTTCACACTGGGATTCTTCAGTCCTGAGAATTCATCCAATCGTTACCTAGGAATTTGGTACATGTTAAAAACCACAGTGATATGGGTGGCTAATAGAAAAGAACCCCTCACAGATCCTCCAGGGATGCTCAAGATATCTGAGAGTGGCAATCTTGTGATACTAGATGGAAAGGAACATGTAGTTTGGTCATCAGATGGATCGGATAATGACACATCCCACGTCATTTTGCAGCTACAGGATTCTGGAAATCTTGTGCTGAAGAACAATATCACTGGAAAAGTGATATGGCAAAGCTTCCACCATCTTTCTGACACACTGCTGTTTCCTACTAGTGGTGGGTATAATGCACAAGCAGGTCAGAAATTCATGTTGACATCATGGAAAAGCCCTTCTGATCCCTCCATAGGAAGCTTTACAGCTTCTATGGGACCTAGTACAGTTCCTCAAACGTTTATTTGGAACAACACTCACCCATATTGGCGGGGAGGTCCATGGGATGGTCGAATCTTCGCTGGCATACCCAATTTGGAGGATCAGTATCTCAATTATGGATTCACATCGGAAAAAGCAAATGGTACTTTCTATTTATACTTTGTATATATAAAACTTTTACCTTTATCATTCTATAAGTTGAACTTTGAAGGGAAACTGGTATTTCATAACTGGGATGACAATAAAAAAGAGTGGGTACCCCAATGGACAGTGCAGCAATCAGACTGTGACATTTATGGCATTTGTGGATCGTTTGGAAGCTGTAATCCACAAAGAAAGCCAATTTGTAGCTGTTTACGTGGTTTCATTCCAAAAAATGGTGAAGAATGGAATAAAGGAAAGCGGACTAGTGGATGCGTAAGGAGGAAGCCATTGAAGTGTGACAGAGCCAAAAATGAAACCAGAAATGGACATGATGATGATGGGTTTGTGCTATTGGAGAATACCAAAGTTCCAGACCTACTAAATGGGACTTTCACTGTATCAGCATTACCAAATTGCAGAGTCCAGTGCTTGAACAATTGTTCCTGCTTAGCATATGCCTATGATGCGGGCATTGGTTGTATGATGTGGAGTGAAAATCTGATTGACATACAAAGGTTCTCAAGTGATGGTCTCAGCCTGTACATTCGTCTGGCAGATTCGGAATTGAGTAACTCATCAATGAACTACAACTGTTTTGAATTTGAAAAGCTTGCAGCTGCAACCAACAACTTTCATTCTGCTAATAAGATTGGGCAGGGTGGTTTTGGTCCAGTATACAAAGGAAAACTGCAAGATGGACAAGAAGTTGTTGCAGTTAAAAGGCTTTCAAGTGTAACAGGACAAGGACGTGAAGAATTCATGACTGAGGTGGTGGTAATTTCTAAACTTCAGCATCGCAATCTCGTAAGACTTCTTGGTTGCTGTGTAGAAGGAGGTGAAAAGATGTTAATTTATGAATACATGACAAATAAAAGTTTGGCTGCATATCTCTTCGATCCATCCAAATGTGATGTCCTTGATTGGCAGAAGCGTTATTGCATAATAGAAGGAACTGCTCGAGGTTTGCTCTATCTTCATAGAGATTCAAGATTAAGAATAATACATAGAGATCTCAAGGCAAGCAACATCTTATTGGATGAGCTAAATCCTAAAATATCAGATTTTGGCACAGCAAGAATCTTTGGAGTTAACAAAGATGAGGACTATACAAGAAGAGTGGTTGGAACATAG 1851 0.4009 MGVRVYTEVLGVFLLCACYYSFLASGLDTLTASKRMKDPDILTSNSTNFTLGFFSPENSSNRYLGIWYMLKTTVIWVANRKEPLTDPPGMLKISESGNLVILDGKEHVVWSSDGSDNDTSHVILQLQDSGNLVLKNNITGKVIWQSFHHLSDTLLFPTSGGYNAQAGQKFMLTSWKSPSDPSIGSFTASMGPSTVPQTFIWNNTHPYWRGGPWDGRIFAGIPNLEDQYLNYGFTSEKANGTFYLYFVYIKLLPLSFYKLNFEGKLVFHNWDDNKKEWVPQWTVQQSDCDIYGICGSFGSCNPQRKPICSCLRGFIPKNGEEWNKGKRTSGCVRRKPLKCDRAKNETRNGHDDDGFVLLENTKVPDLLNGTFTVSALPNCRVQCLNNCSCLAYAYDAGIGCMMWSENLIDIQRFSSDGLSLYIRLADSELSNSSMNYNCFEFEKLAAATNNFHSANKIGQGGFGPVYKGKLQDGQEVVAVKRLSSVTGQGREEFMTEVVVISKLQHRNLVRLLGCCVEGGEKMLIYEYMTNKSLAAYLFDPSKCDVLDWQKRYCIIEGTARGLLYLHRDSRLRIIHRDLKASNILLDEXLNPKISDFGTARIFGVNKDEDYTRRVVGT 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3744g00020 617 SUPERFAMILY Protein kinase-like (PK-like) 430 617 IPR011009 -
Pral3744g00020 617 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 147 - -
Pral3744g00020 617 Pfam PAN-like domain 351 410 IPR003609 -
Pral3744g00020 617 Pfam Protein tyrosine and serine/threonine kinase 454 611 IPR001245 GO:0004672|GO:0006468
Pral3744g00020 617 ProSitePatterns Serine/Threonine protein kinases active-site signature. 573 585 IPR008271 GO:0004672|GO:0006468
Pral3744g00020 617 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 215 IPR036426 -
Pral3744g00020 617 ProSiteProfiles Bulb-type lectin domain profile. 27 147 IPR001480 -
Pral3744g00020 617 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 528 617 - -
Pral3744g00020 617 CDD PAN_AP_plant 336 425 - -
Pral3744g00020 617 SMART ntp_6 350 424 IPR003609 -
Pral3744g00020 617 Gene3D - 21 148 IPR036426 -
Pral3744g00020 617 Pfam S-locus glycoprotein domain 208 318 IPR000858 GO:0048544
Pral3744g00020 617 SMART serkin_6 451 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3744g00020 617 Pfam D-mannose binding lectin 73 176 IPR001480 -
Pral3744g00020 617 Gene3D Phosphorylase Kinase; domain 1 421 527 - -
Pral3744g00020 617 Gene3D Transferase(Phosphotransferase) domain 1 528 617 - -
Pral3744g00020 617 ProSiteProfiles Protein kinase domain profile. 451 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3744g00020 617 CDD B_lectin 41 149 IPR001480 -
Pral3744g00020 617 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 419 527 - -
Pral3744g00020 617 SMART blect_4 33 150 IPR001480 -
Pral3744g00020 617 ProSiteProfiles PAN/Apple domain profile. 339 425 IPR003609 -
Pral3744g00020 617 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3744g00020 Pral-Chr3744 554535 557570 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3744g00020 439 617 Receptor kinase-like Gene Family AT4G11530 64.246 1.75e-70 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3744g00020 PK_Tyr_Ser-Thr 1.3e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3744g00020 - - tcc:18599546 659.833