Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3744g00018 ATGGGTGTCACAGTTTATACAGAAGTTTTAGGTATTTTCCTCATATGTGCTTGCTATTTTTCATTTTTAGCCTTTGGCTTAGATACTCTTACAGCATCTGAGAGCATGAGAGATCCCGATACTCTAACCTCTGATAGCACCAACTTTACACTTGGATTTTTTAGCCCTGACAACTCATCCAATCGTTACCTAGGAATTTGGTACATGGTAAAGGCCACAGTGGTATGGGTGGCTAACAGAAACGAACCACTCACAGATTCTTCTGGGATGCTCAAGATATCTGAAAGTGGCAATCTTGTGATACTAGATGGAAAGGAACGTGCTGTTTGGTCATCAGATGGATCAGACAATGACACATCTCATGTCATATTGCAGCTGCAGGATTCTGGAAATCTTGTGCTGCAGAACAATATCACAGGAAAAGTGATATGGCAAAGCTTCCACCATCTTTCTGATACAATGCTGCAACGCACTAATGGTGGTTATAATGCACAAGTAGGTCAGAAATACATGTTGACGTCATGGAAGAGCCCTTCTGATCCATCAATGGGAAGCTTTACAGCTTCTATGGGACCTAGTACAGTTCCTCAAACATTTGTTTGGAACAACAGTCGCCCATATTGGCGTGGAGGTCCGTGGAATGGTCAAATTTTCACTGGCATACCCAATTTGTACGATCAGTATCTCAATGGATTAACTTTGCAAAAAGTAAATGGTACTTTCTATTTATATTTTGTATATATAAACCTCTCTCCTTTATCATTCTATAAGCTGAACTCTGAAGGGAAACTGGTATTTCATAACTGGGATGACAATAAGAAAGAGTGGGTGCCGCAGTGGACAGTGCAGCAATCAGACTGTGACATTTATGGCATTTGTGGATCATTTGGAAGCTGTAATCCACAAAGAAACCCAATTTGTAGCTGTCTGAGAGGTTTTGTTCCAAAAAATGCTGAAGAGTGGAATAAAGGAAACTGGAATAGTGGATGCGCAAGGAGGAAGCCATTGAAGTGTGAAAGACTCAAAAATGAGAACAGAAACGGACATGATGATGATGGGTTTGTGCAGTTAAAGAATACCAAAGTTCCAGACCTACCAAATGGGACTTTCACTGTATCAGCATCACCAGATTGCAGAATCCAGTGCTTGAACAATTGTTCCTGCTTAGCATATGCCCATGATGCGGGCATTGGTTGTATGATGTGGAGTGAAAAACTGATTGACACACAAAGGCTGTCAAGTGGTGGTCTCGACCTGTACATTCGTCTGGCAGATTCAGAACTGAAGGAAAAGAGTAGATTAGCAGTGATAATTTTGATTCCATCGGCAGTCGGAATAATTCTAATCGCAGCATGTGCATATGCAATATGGAGACGCTCTGTTAAGCATCAAGAAGAACCATTGACAATAGCAGAGAACGAAATCAATAGCCAGATGCTGAAGGAACTACAACTGTTTGAATTTGAAAAGCTTGCAGCTGCAACCAACAACTTTCATTCTGCTAATAAGATTGGGCAGGGTGGTTTTGGTCCAGTATACAAAGGAAAATTGCAAGACGGACAAGAAGTTGCAGTTAAAAGACTTTCAAGTGTAACAGGACAAGGACGCGAAGAATTTATGACTGAGGTGGTGGTGATTTCTAAACTTCAGCATCGCAATCTCGTGAGACTTCTTGGTTGCTGTGTAGAAGGAGGTGAAAAGATGTTAATTTATGAATACATGCCAAATAAAACTTTGGCTGCCTATCTCTTTGATCCACTCAATGGTGATGTCTTGAATTGGCAAAAGCGTTATCATATAATAGAAGGAACTGCTCGAGGTTTGCTCTATCTTCACAGAGATTCAAGACTAAGAATTATACATAGAGATCTTAAGGCAAGCAACATCTTATTGGATGAAGAGCTAAATCCCAAGATATCAGATTTTGGTACAGCAAGGATCTTTGGAGTTAGCAAAGATGAGGACTATACAAGAAGAGTAGTTGGAACATATGGCTATATGCCTCCAGAATATGTAATAGAGGGCATTTTTTCTGAGAAATCAGATGTCTTTAGTTTTGGAGTTTTGCTATTGGAGACAATTAGCGGGAGAAAAAATACAAGCTTCCACAATGATCAGCAACCTTTGAGTCTCCTAGGATTTGCGTGGAAACTATGGAATGAAGAGAATATCAAACCTTTGATAGATCATACGATATATAACCCACAATTTGAAAAGGATATTATGAAATGCATACATATCGGGTTATTGTGTGTGCAAGAACTTGCAAAGGATCGACCTACCATGGATTCTGTGATCTTAATGCTGCAAAGCAAGATTGTCAATTTGCCTTTCCCCAAGCAACCTGCCTTCATCAATTGGCAGGCTGCACTTGCAGAGAGTTCCCAGAATGAACATAAATCTAGCTCGAATAATCATGTCACTATCACAAACATCCAGGGCAGATAG 2448 0.4024 MGVTVYTEVLGIFLICACYFSFLAFGLDTLTASESMRDPDTLTSDSTNFTLGFFSPDNSSNRYLGIWYMVKATVVWVANRNEPLTDSSGMLKISESGNLVILDGKERAVWSSDGSDNDTSHVILQLQDSGNLVLQNNITGKVIWQSFHHLSDTMLQRTNGGYNAQVGQKYMLTSWKSPSDPSMGSFTASMGPSTVPQTFVWNNSRPYWRGGPWNGQIFTGIPNLYDQYLNGLTLQKVNGTFYLYFVYINLSPLSFYKLNSEGKLVFHNWDDNKKEWVPQWTVQQSDCDIYGICGSFGSCNPQRNPICSCLRGFVPKNAEEWNKGNWNSGCARRKPLKCERLKNENRNGHDDDGFVQLKNTKVPDLPNGTFTVSASPDCRIQCLNNCSCLAYAHDAGIGCMMWSEKLIDTQRLSSGGLDLYIRLADSELKEKSRLAVIILIPSAVGIILIAACAYAIWRRSVKHQEEPLTIAENEINSQMLKELQLFEFEKLAAATNNFHSANKIGQGGFGPVYKGKLQDGQEVAVKRLSSVTGQGREEFMTEVVVISKLQHRNLVRLLGCCVEGGEKMLIYEYMPNKTLAAYLFDPLNGDVLNWQKRYHIIEGTARGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGTARIFGVSKDEDYTRRVVGTYGYMPPEYVIEGIFSEKSDVFSFGVLLLETISGRKNTSFHNDQQPLSLLGFAWKLWNEENIKPLIDHTIYNPQFEKDIMKCIHIGLLCVQELAKDRPTMDSVILMLQSKIVNLPFPKQPAFINWQAALAESSQNEHKSSSNNHVTITNIQGR 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3744g00018 815 CDD PAN_AP_plant 335 424 - -
Pral3744g00018 815 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 147 - -
Pral3744g00018 815 SMART ntp_6 349 423 IPR003609 -
Pral3744g00018 815 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 462 573 - -
Pral3744g00018 815 Pfam PAN-like domain 350 409 IPR003609 -
Pral3744g00018 815 ProSiteProfiles PAN/Apple domain profile. 338 424 IPR003609 -
Pral3744g00018 815 PIRSF SRK 2 815 IPR024171 GO:0004674
Pral3744g00018 815 ProSiteProfiles Protein kinase domain profile. 498 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3744g00018 815 CDD STKc_IRAK 504 770 - -
Pral3744g00018 815 Gene3D Transferase(Phosphotransferase) domain 1 574 776 - -
Pral3744g00018 815 Gene3D - 22 148 IPR036426 -
Pral3744g00018 815 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 181 IPR036426 -
Pral3744g00018 815 CDD B_lectin 41 149 IPR001480 -
Pral3744g00018 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Pral3744g00018 815 Pfam Protein tyrosine and serine/threonine kinase 501 766 IPR001245 GO:0004672|GO:0006468
Pral3744g00018 815 Gene3D Phosphorylase Kinase; domain 1 459 573 - -
Pral3744g00018 815 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 574 777 - -
Pral3744g00018 815 MobiDBLite consensus disorder prediction 795 815 - -
Pral3744g00018 815 Pfam D-mannose binding lectin 73 176 IPR001480 -
Pral3744g00018 815 SUPERFAMILY Protein kinase-like (PK-like) 481 795 IPR011009 -
Pral3744g00018 815 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 760 - -
Pral3744g00018 815 SMART serkin_6 498 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3744g00018 815 Pfam S-locus glycoprotein domain 208 317 IPR000858 GO:0048544
Pral3744g00018 815 SMART blect_4 33 150 IPR001480 -
Pral3744g00018 815 ProSiteProfiles Bulb-type lectin domain profile. 27 147 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3744g00018 Pral-Chr3744 399000 403023 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3744g00018 429 785 Receptor kinase-like Gene Family AT4G05200 51.397 2.42e-119 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3744g00018 PK_Tyr_Ser-Thr 2.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3744g00018 - - qsa:O6P43_012540 950.273