Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3744g00011 ATGCCCGAAGAATATTTTTTTGATGGAGAAGACAATTCCAATTTAACTCTGTTTGCCCTAAAGGACATAGTTGAGGCAACAAACAATTTCGCAGATGCTAATGTGCTTGGAAAAGGTGGCTTTGGTTCAAGGCTATCAAAGTATTCTGGACAAGGCATTGAAGAATTCAGGAATGAGGTTACTTTAATTGCAAAGCTTCAACATAGAAATCTTGTGAGGATCTTAGGTTGTTGCGTAGATGGAGAAGAAAAGATGGTGGTATATGAATATTTGCCAAACAAAAGCTTGGACTCTTTCATCTTTGATCAAGCAAACAAACTACACTTAGATTGGAGGAAAAGATTTGACATCATTTGTGGAGTTGCAAGAGGAATTTTATACCTTCATCAATATTCAAGAATAAGAATAATTCATAGAGACTTAAAGGCTATCAGTGTCTTGTTAGATCTTGCAATGAACCCAAAGATTGCAGATTTTGGTATGGCAAGAATATTTGGTGGAGGCCAAACTGAAGCAAACACAAACCGTGTTGTTGGAACTTATAGTTATATGTCACTTGAATATGCAATGGAAGGCATTTTTTCAATAAAATCAGATGTGTACAGTTTTGGAGTTTTACTTTTGGAGATTATTTGGAATCTTTGGAAAGAAAGTCGAGCTATGGAGATTGTTGATCCATCATTACTAGATGAAACATGCCCTGAACATGAAGTTCTGAAAAGCATCCAGATTCAGCTTTTATGTGTGCTAGACAACACTGGTCATGAGACACGAACTATTTGGCGAGCTAGGAGAATAATTGGCTCCAAGTTTGGAGAAGACGACTCCAATTTAACTCTGTTTGACCAAAAGCACATCGTTGAGGCAACAAACAATTTCGCAGATGCTAATATGCTTGGAAAAGGTGGCTTTGGTTTAGTATACAAGGGTCTACTTGAAGATGGAATGGAAATAGCAGTTAAGAGGCTATCAAGGTATTCTGGACAAGGCATTGAAGAATTCAGGAATGAGGTTACTTTAATTGCAAAGCTTCAACATAGAAATCTTGTAAGGATCTTAGCTTGTTACGTAGATGGAGAAGAAAAGATGGTGGTATATGAATATTTGCCAAACAAAAGCTTGGACTCTTTCATCTTTGATCAAGCAAACAAGCCAAAGTTAGATTGGAGGAAAAGATTTGACATCATTTGTGGAGTTGCAAGAGGAATTTTATACCCTTTTCAAGATTCAATATTAAGAATAATTCATAAAGACTTAAAGGCTAGCAATGTCTTGTTGGATCTTGTAATGAACCCAAAAATTGCAGATTTTGGTATGGCAAGAATATTTGGTGGAAACCAAACTGAAGCAATCACAAACCGTGTTGTTAGAACTTATGGTTATATGTCATCTGAATATGCAATGGAAGGAATTTTTTCAATAAAATCAGATGCATGCAGTTTTGGAGTTTTACTTTTGGAAATTGTTACTAGCAGGAAGAATAATGGTCATTATGATGACATTACTTGTACTTTTATTTGGAATCTTTGGAGAGAAAGTCGAGCTATGGAAATTGTTGATCCATCATTACTAGGCGAAACATGCCCTGAACATGAAGTTCTCAAATGCATCCAGATTGGGCTTCTATGTGAGCAAGAATATGCAACAGATAGGCCTACCATGTCAGAAGTTGTTTTCATGTTGGATAATGACTCGACTCTTCCCCCTCCAAAGCAACCGGCATTTCTTTTCAAGAAAAATAAGTATTATGATTCAAATCCATCAATTAGTAAAGGAGTTAATTCAGTTAATAAGATGAGTACTACTGTGGTTGAAGCTCACTGA 1824 0.3618 MPEEYFFDGEDNSNLTLFALKDIVEATNNFADANVLGKGGFGSRLSKYSGQGIEEFRNEVTLIAKLQHRNLVRILGCCVDGEEKMVVYEYLPNKSLDSFIFDQANKLHLDWRKRFDIICGVARGILYLHQYSRIRIIHRDLKAISVLLDLAMNPKIADFGMARIFGGGQTEANTNRVVGTYSYMSLEYAMEGIFSIKSDVYSFGVLLLEIIWNLWKESRAMEIVDPSLLDETCPEHEVLKSIQIQLLCVLDNTGHETRTIWRARRIIGSKFGEDDSNLTLFDQKHIVEATNNFADANMLGKGGFGLVYKGLLEDGMEIAVKRLSRYSGQGIEEFRNEVTLIAKLQHRNLVRILACYVDGEEKMVVYEYLPNKSLDSFIFDQANKPKLDWRKRFDIICGVARGILYPFQDSILRIIHKDLKASNVLLDLVMNPKIADFGMARIFGGNQTEAITNRVVRTYGYMSSEYAMEGIFSIKSDACSFGVLLLEIVTSRKNNGHYDDITCTFIWNLWRESRAMEIVDPSLLGETCPEHEVLKCIQIGLLCEQEYATDRPTMSEVVFMLDNDSTLPPPKQPAFLFKKNKYYDSNPSISKGVNSVNKMSTTVVEAH 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3744g00011 607 Pfam Protein tyrosine and serine/threonine kinase 49 212 IPR001245 GO:0004672|GO:0006468
Pral3744g00011 607 Pfam Protein tyrosine and serine/threonine kinase 297 559 IPR001245 GO:0004672|GO:0006468
Pral3744g00011 607 SMART serkin_6 30 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3744g00011 607 SMART serkin_6 293 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3744g00011 607 SUPERFAMILY Protein kinase-like (PK-like) 15 212 IPR011009 -
Pral3744g00011 607 ProSiteProfiles Protein kinase domain profile. 1 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3744g00011 607 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 91 211 - -
Pral3744g00011 607 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 260 368 - -
Pral3744g00011 607 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 369 569 - -
Pral3744g00011 607 ProSiteProfiles Protein kinase domain profile. 293 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3744g00011 607 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 270 585 - -
Pral3744g00011 607 Gene3D Transferase(Phosphotransferase) domain 1 91 258 - -
Pral3744g00011 607 Gene3D Transferase(Phosphotransferase) domain 1 369 567 - -
Pral3744g00011 607 Gene3D Phosphorylase Kinase; domain 1 259 368 - -
Pral3744g00011 607 ProSitePatterns Protein kinases ATP-binding region signature. 299 321 IPR017441 GO:0005524
Pral3744g00011 607 Gene3D Phosphorylase Kinase; domain 1 6 90 - -
Pral3744g00011 607 SUPERFAMILY Protein kinase-like (PK-like) 277 561 IPR011009 -
Pral3744g00011 607 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3744g00011 Pral-Chr3744 283434 291617 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3744g00011 262 578 Receptor kinase-like Gene Family AT4G23150 52.905 2.09e-109 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3744g00011 PK_Tyr_Ser-Thr 2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3744g00011 - - pcin:129284814 526.554