Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3744g00008 ATGCTTTTCGTGGGATTCAGTGAAAATACTTGCTTGTTACTTGCTTTTCTCATCTATTCGTTCACTTTTACTCTTATGGTTAGTGGCTTGGATACCGTCGCACCATCTGTGTTGATCCAAGAACCTGAAACGGTGAGCTCAAATAATGGCATGTTCACTCTGGGATTTTTCAGACCTCAGAATTCCACAAGATGCTATTTAGGAATTTGGTTTATGTCTGAATCCTTTGTTGTTTGGGTGGCTAACGAAAACGATCCACTAACAGATTCTTCTGGGATTCTGACAATATCAGGGAATGGCAATCTTGTTGTTTTGAATGGGCAAAAACAGGTTGTTTGGTCAACAAATGTCTCAACGGCATCAAATTCTAGTGCTCAACTCTTAGATTCTGGCAATCTTGTCCTCATTGATAGAACTACTGGGGCATTCCTGTGGCAGAGTTTCCAGCATCCTAGCAATACATTATTAGAAGGCATGAAACTCAGCACCAATAAAAAAACAGGCAAGAAAATGCTACTGACATCATGGAAAAGCACATCTGATCCATCCTATGGAGGATTTTCTCTCAGTCTTGAACCACATAATGTCACTGAAATGTTCGTGTGGAAAGAAAATCATCCTTACTGGCGGTCTGGTCCTTGGGATGGCACAGCCTTCCTTGGAATACCTTGGATGACTCAATCTATCTTCCAGAATGGTGTTCAGATTAAAGAAGAGGAAGGGATTTATAACATATCTTATGATCAAACAAACAAGGCTATCTTGGTGACTATAATATTAGATTCTCAAGGTATAGTGAAACCAATGATTTGGAATTCCAAGGCAAATATTTGGGAACCTCAAAGGAAAGGCTTTCATTCTGAGTGTGATGTTTATGGCATATGCGGCCCATCCGGGATCTGCAGTAAGCGGGGCTCACCACCAATCTGCAGCTGCTTGAAAGGGTTTGAACCAAAGAACAAAGAAGAATGGGCAAGACGGAACTGGACCAGTGGGTGTATGAGAAGAGAAGCACTTCAGTGTGAGAGAGACAAATATGGTTCTCAAGCTAGCAAACCAGATGGGTATTTTAAGCTGGAAAAGATAAAGCCACCAGATCATGCAGAACTGCTACTTTCTATCTCAGGGGATATTATAGATTGTCAAATTATGTGCCTAAAGAATTGCTCTTGCATAGCTTATGCCTATGAAAGAAGAATTGGTTGTATGGTTTGGAATGAAGATTTACTTGACCTACAAATCTTCCCATTCAGAGGGGTTGATTTGTGCATACGTTTGGCCCACTCAGAGCTAGGTATAGACAGGAGGAAAATGACAGCAGCTATTCTAATATCAGTTTTGATAGGAATAGTTCTCATTACTGCCTTTGGATATTTCTTATGGAAAAAAGTGTCAAAGCAAAAAGGGGAAATGCATTTGCAAATTCACAACAGCAAGAGGATGAGGAACCTGAAACAAGTCAAAATTCAAGACCTATCATTGTTCGATTTTAGAAAGTTGGCAACTGCAACAAATAACTTTGACATAGCAAATAAACTTGGACAGGGTGGTTTTGGTCCAGTTTACAAGGGAAAGTTTGAAGATGGACAAGAAATTGCAATAAAAAGATTATCTAGGTCATCTGGACAGGGTGTGGAAGAATTTATCAATGAAGTGGAGTTGATTTCTAAGCTTGAACACCAAAACCTAGTCACACTTCTTGGCTGTTGCATTGAAGGGGAAGAAGTGATATTGGTTTATGAATTCATGCCAAACAAAAGTTTGGATGAACATATCTTCGATCCACTACAACAAAAATCTTTAGATTGGGGGAAGCGCTGCAACATAATAGAAGGAATAGCTAGAGGATTGCTCTATCTTCACAGAGATTCAAGATTAAGAATCATACATAGGGATTTGAAGGCAAGTAACATCTTATTAGATGAAAAACTGAATCCAAAGATATCAGATTTTGGACTAGCTAAACTTTTTGGAGGAGATGAGGATCAAGCAAACACTAAAAGAATTGTTGGAACATATGGCTACATTTCTCCAGAATATGCAACAGAAGGGCTCTATTCAGAGAAATCTGATGTCTTTAGCTTTGGCATTTTGTTACTAGAGGTTATTACTGGAAGAAAAAACACTAGCTTTTATGAAGATGCAGAGTCTCTCACACTTTTAGGATTCGCATGGAAATTATGGCTTGATGGCAATGTTATACGTTTAATAGATCCAAAAATATATGATGCAAGCTTTGAGAAGGATTTGTTGAGATGCATACATATAGGTCTTCTCTGTGTGCAAGAACTTGCAAAAGATAGGCCCACTATGGCCTCTGTGATGTCAATGCTCCAAAGTGATATTGTGGATATTTCTCCTCCAAGCCAACCTGCATTCATCCTCAGGCAAACCATGTCTTGTACTGCAGAGCAAACTCCAAATAATGATGCCTTATGTTCCATCAATAATGTAACCATCTCAAAGTTTGAGGGGAGATAG 2481 0.3914 MLFVGFSENTCLLLAFLIYSFTFTLMVSGLDTVAPSVLIQEPETVSSNNGMFTLGFFRPQNSTRCYLGIWFMSESFVVWVANENDPLTDSSGILTISGNGNLVVLNGQKQVVWSTNVSTASNSSAQLLDSGNLVLIDRTTGAFLWQSFQHPSNTLLEGMKLSTNKKTGKKMLLTSWKSTSDPSYGGFSLSLEPHNVTEMFVWKENHPYWRSGPWDGTAFLGIPWMTQSIFQNGVQIKEEEGIYNISYDQTNKAILVTIILDSQGIVKPMIWNSKANIWEPQRKGFHSECDVYGICGPSGICSKRGSPPICSCLKGFEPKNKEEWARRNWTSGCMRREALQCERDKYGSQASKPDGYFKLEKIKPPDHAELLLSISGDIIDCQIMCLKNCSCIAYAYERRIGCMVWNEDLLDLQIFPFRGVDLCIRLAHSELGIDRRKMTAAILISVLIGIVLITAFGYFLWKKVSKQKGEMHLQIHNSKRMRNLKQVKIQDLSLFDFRKLATATNNFDIANKLGQGGFGPVYKGKFEDGQEIAIKRLSRSSGQGVEEFINEVELISKLEHQNLVTLLGCCIEGEEVILVYEFMPNKSLDEHIFDPLQQKSLDWGKRCNIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDEKLNPKISDFGLAKLFGGDEDQANTKRIVGTYGYISPEYATEGLYSEKSDVFSFGILLLEVITGRKNTSFYEDAESLTLLGFAWKLWLDGNVIRLIDPKIYDASFEKDLLRCIHIGLLCVQELAKDRPTMASVMSMLQSDIVDISPPSQPAFILRQTMSCTAEQTPNNDALCSINNVTISKFEGR 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3744g00008 826 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 17 769 - -
Pral3744g00008 826 SMART ntp_6 351 426 IPR003609 -
Pral3744g00008 826 SMART blect_4 36 151 IPR001480 -
Pral3744g00008 826 SMART serkin_6 507 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3744g00008 826 Pfam Protein kinase domain 509 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3744g00008 826 Gene3D - 27 149 IPR036426 -
Pral3744g00008 826 ProSiteProfiles Bulb-type lectin domain profile. 30 148 IPR001480 -
Pral3744g00008 826 Pfam PAN-like domain 351 412 IPR003609 -
Pral3744g00008 826 SUPERFAMILY Protein kinase-like (PK-like) 492 800 IPR011009 -
Pral3744g00008 826 Gene3D Transferase(Phosphotransferase) domain 1 583 785 - -
Pral3744g00008 826 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 26 148 - -
Pral3744g00008 826 ProSiteProfiles Protein kinase domain profile. 507 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3744g00008 826 Gene3D Phosphorylase Kinase; domain 1 466 582 - -
Pral3744g00008 826 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 182 IPR036426 -
Pral3744g00008 826 CDD B_lectin 43 151 IPR001480 -
Pral3744g00008 826 ProSiteProfiles PAN/Apple domain profile. 341 427 IPR003609 -
Pral3744g00008 826 CDD STKc_IRAK 513 779 - -
Pral3744g00008 826 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 583 786 - -
Pral3744g00008 826 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Pral3744g00008 826 Pfam S-locus glycoprotein domain 209 320 IPR000858 GO:0048544
Pral3744g00008 826 PIRSF SRK 5 826 IPR024171 GO:0004674
Pral3744g00008 826 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 471 582 - -
Pral3744g00008 826 Pfam D-mannose binding lectin 77 177 IPR001480 -
Pral3744g00008 826 CDD PAN_AP_plant 339 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3744g00008 Pral-Chr3744 162706 166765 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3744g00008 438 793 Receptor kinase-like Gene Family AT4G23230 51.685 2.44e-121 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3744g00008 Pkinase 1.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3744g00008 - - qsa:O6P43_012541 927.932