Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3744g00006 ATGCTTTTCGTGGGATTCAGTGAAAATACTTGCTTGTTACTTGCTTTTCTCATCTATTCGTTCACTTTTACTCTTATGGTTAGTGGCTTGGATACCGTCGCACCATCTGTGTTGATCCAAGAACCTGAAACGGTGAGCTCAAATAATGGCATGTTCACTCTGGGATTTTTCAGACCTCAGAATTCCACAAGATGCTATTTAGGAATTTGGTTTATGTCTGAATCCTTTGTTGTTTGGGTGGCTAACGAAAACGATCCACTAACAGATTCTTCTGGGATTCTGACAATATCAGGGAATGGCAATCTTGTTGTTTTGAATGGGCAAAAACAGGTTGTTTGGTCAACAAATGTCTCAACGGCATCAAATTCTAGTGCTCAACTCTTAGATTCTGGCAATCTTGTCCTCATTGATAGAACTACTGGGGCATTCCTGTGGCAGAGTTTCCAGCATCCTAGCAATACATTATTAGAAGGCATGAAACTCAGCACCAATAAAAAAACAGGCAAGAAAATGCTACTGACATCATGGAAAAGCACATCTGATCCATCCTATGGAGGATTTTCTCTCAGTCTTGAACCACATAATGTCACTGAAATGTTCGTGTGGAAAGAAAATCATCCTTACTGGCGGTCTGGTCCTTGGGATGGCACAGCCTTCCTTGGAATACCTTGGATGACTCAATCTATCTTCCAGAATGGTGTTCAGATTAAAGAAGAGGAAGGGATTTATAACATATCTTATGATCAAACAAACAAGGCTATCTTGGTGACTATAATATTAGATTCTCAAGGTATAGTGAAACCAATGATTTGGAATTCCAAGGCAAATATTTGGGAACCTCAAAGGAAAGGCTTTCATTCTGAGTGTGATGTTTATGGCATATGCGGCCCATCCGGGATCTGCAGTAAGCGGGGCTCACCACCAATCTGCAGCTGCTTGAAAGGGTTTGAACCAAAGAACAAAGAAGAATGGGCAAGACGGAACTGGACCAGTGGGTGTATGAGAAGAGAAGCACTTCAGTGTGAGAGAGACAAATATGGTTCTCAAGCTAGCAAACCAGATGGGTATTTTAAGCTGGAAAAGATAAAGCCACCAGATCATGCAGAACTGCTACTTTCTATCTCAGGGGATATTATAGATTGTCAAATTATGTGCCTAAAGAATTGCTCTTGCATAGCTTATGCCTATGAAAGAAGAATTGGTTGTATGGTTTGGAATGAAGATTTACTTGACCTACAAATCTTCCCATTCAGAGGGGTTGATTTGTGCATACGTTTGGCCCACTCAGAGCTAGGTATAGACAGGAGGAAAATGACAGCAGCTATTCTAATATCAGTTTTGATAGGAATAGTTCTCATTACTGCCTTTGGATATTTCTTATGGAAAAAAGTGTCAAAGCAAAAAGGTGATTCTTTTTTTCATTGGGAAATGCATTTGCAAATTCACAACAGCAAGAGGATGAGGAACCTGAAACAAGTCAAAATTCAAGACCTATCATTGTTCGATTTTAGAAAGTTGGCAACTGCAACAAATAACTTTGACATAGCAAATAAACTTGGACAGGGTGGTTTTGGTCCAGTTTACAAGGGAAAGTTTGAAGATGGACAAGAAATTGCAATAAAAAGATTATCTAGGTCATCTGGACAGGGTGTGGAAGAATTTATCAATGAAGTGGAGTTGATTTCTAAGCTTGAACACCAAAACCTAGTCACACTTCTTGGCTGTTGCATTGAAGGGGAAGAAGTGATATTGGTTTATGAATTCATGCCAAACAAAAGTTTGGATGAACATATCTTCGATCCACTACAACAAAAATCTTTAGATTGGGGGAAGCGCTGCAACATAATAGAAGGAATAGCTAGAGGATTGCTCTATCTTCACAGAGATTCAAGATTAAGAATCATACATAGGGATTTGAAGGCAAGTAACATCTTATTAGATGAAAAACTGAATCCAAAGATATCAGATTTTGGACTAGCTAAACTTTTTGGAGGAGATGAGGATCAAGCAAACACTAAAAGAATTGTTGGAACATAG 2037 0.3908 MLFVGFSENTCLLLAFLIYSFTFTLMVSGLDTVAPSVLIQEPETVSSNNGMFTLGFFRPQNSTRCYLGIWFMSESFVVWVANENDPLTDSSGILTISGNGNLVVLNGQKQVVWSTNVSTASNSSAQLLDSGNLVLIDRTTGAFLWQSFQHPSNTLLEGMKLSTNKKTGKKMLLTSWKSTSDPSYGGFSLSLEPHNVTEMFVWKENHPYWRSGPWDGTAFLGIPWMTQSIFQNGVQIKEEEGIYNISYDQTNKAILVTIILDSQGIVKPMIWNSKANIWEPQRKGFHSECDVYGICGPSGICSKRGSPPICSCLKGFEPKNKEEWARRNWTSGCMRREALQCERDKYGSQASKPDGYFKLEKIKPPDHAELLLSISGDIIDCQIMCLKNCSCIAYAYERRIGCMVWNEDLLDLQIFPFRGVDLCIRLAHSELGIDRRKMTAAILISVLIGIVLITAFGYFLWKKVSKQKGDSFFHWEMHLQIHNSKRMRNLKQVKIQDLSLFDFRKLATATNNFDIANKLGQGGFGPVYKGKFEDGQEIAIKRLSRSSGQGVEEFINEVELISKLEHQNLVTLLGCCIEGEEVILVYEFMPNKSLDEHIFDPLQQKSLDWGKRCNIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDEKLNPKISDFGLAKLFGGDEDQANTKRIVGT 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3744g00006 678 CDD B_lectin 43 151 IPR001480 -
Pral3744g00006 678 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 26 148 - -
Pral3744g00006 678 Gene3D Transferase(Phosphotransferase) domain 1 589 678 - -
Pral3744g00006 678 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 589 678 - -
Pral3744g00006 678 SMART ntp_6 351 426 IPR003609 -
Pral3744g00006 678 SMART blect_4 36 151 IPR001480 -
Pral3744g00006 678 ProSiteProfiles PAN/Apple domain profile. 341 427 IPR003609 -
Pral3744g00006 678 ProSiteProfiles Bulb-type lectin domain profile. 30 148 IPR001480 -
Pral3744g00006 678 Pfam S-locus glycoprotein domain 209 320 IPR000858 GO:0048544
Pral3744g00006 678 SUPERFAMILY Protein kinase-like (PK-like) 497 678 IPR011009 -
Pral3744g00006 678 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 182 IPR036426 -
Pral3744g00006 678 SMART serkin_6 513 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3744g00006 678 Pfam Protein kinase domain 515 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3744g00006 678 Pfam PAN-like domain 351 412 IPR003609 -
Pral3744g00006 678 ProSiteProfiles Protein kinase domain profile. 513 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3744g00006 678 Gene3D Phosphorylase Kinase; domain 1 474 588 - -
Pral3744g00006 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Pral3744g00006 678 CDD PAN_AP_plant 339 427 - -
Pral3744g00006 678 Gene3D - 27 149 IPR036426 -
Pral3744g00006 678 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 17 672 - -
Pral3744g00006 678 Pfam D-mannose binding lectin 77 177 IPR001480 -
Pral3744g00006 678 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 477 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3744g00006 Pral-Chr3744 162704 166409 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3744g00006 501 678 Receptor kinase-like Gene Family AT4G11530 65.169 5.80e-75 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3744g00006 Pkinase 2.6e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3744g00006 - - qsa:O6P43_012541 724.931