Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3744g00004 ATGCTTTTCGTGGGATTCAGTGAAAATACTTGCTTGTTACTTGCTTTTCTCATCTATTCGTTCACTTTTACTCTTATGGTTAGTGGCTTGGATACCGTCGCACCATCTGTGTTGATCCAAGAACCTGAAACGGTGAGCTCAAATAATGGCATGTTCACTCTGGGATTTTTCAGACCTCAGAATTCCACAAGATGCTATTTAGGAATTTGGTTTATGTCTGAATCCTTTGTTGTTTGGGTGGCTAACGAAAACGATCCACTAACAGATTCTTCTGGGATTCTGACAATATCAGGGAATGGCAATCTTGTTGTTTTGAATGGGCAAAAACAGGTTGTTTGGTCAACAAATGTCTCAACGGCATCAAATTCTAGTGCTCAACTCTTAGATTCTGGCAATCTTGTCCTCATTGATAGAACTACTGGGGCATTCCTGTGGCAGAGTTTCCAGCATCCTAGCAATACATTATTAGAAGGCATGAAACTCAGCACCAATAAAAAAACAGGCAAGAAAATGCTACTGACATCATGGAAAAGCACATCTGATCCATCCTATGGAGGATTTTCTCTCAGTCTTGAACCACATAATGTCACTGAAATGTTCGTGTGGAAAGAAAATCATCCTTACTGGCGGTCTGGTCCTTGGGATGGCACAGCCTTCCTTGGAATACCTTGGATGACTCAATCTATCTTCCAGAATGGTGTTCAGATTAAAGAAGAGGAAGGGATTTATAACATATCTTATGATCAAACAAACAAGGCTATCTTGGTGACTATAATATTAGATTCTCAAGGTATAGTGAAACCAATGATTTGGAATTCCAAGGCAAATATTTGGGAACCTCAAAGGAAAGGCTTTCATTCTGAGTGTGATGTTTATGGCATATGCGGCCCATCCGGGATCTGCAGTAAGCGGGGCTCACCACCAATCTGCAGCTGCTTGAAAGGGTTTGAACCAAAGAACAAAGAAGAATGGGCAAGACGGAACTGGACCAGTGGGTGTATGAGAAGAGAAGCACTTCAGTGTGAGAGAGACAAATATGGTTCTCAAGCTAGCAAACCAGATGGGTATTTTAAGCTGGAAAAGATAAAGCCACCAGATCATGCAGAACTGCTACTTTCTATCTCAGGGGATATTATAGATTGTCAAATTATGTGCCTAAAGAATTGCTCTTGCATAGCTTATGCCTATGAAAGAAGAATTGGTTGTATGGTTTGGAATGAAGATTTACTTGACCTACAAATCTTCCCATTCAGAGGGGTTGATTTGTGCATACGTTTGGCCCACTCAGAGCTAGGTATAGACAGGAGGAAAATGACAGCAGCTATTCTAATATCAGTTTTGATAGGAATAGTTCTCATTACTGCCTTTGGATATTTCTTATGGAAAAAAGTGTCAAAGCAAAAAGGTGATTCTTTTTTTCATTGGGAAATGCATTTGCAAATTCACAACAGCAAGAGGATGAGGAACCTGAAACAAGTCAAAATTCAAGACCTATCATTGTTCGATTTTAGAAAGTTGGCAACTGCAACAAATAACTTTGACATAGCAAATAAACTTGGACAGGGTGGTTTTGGTCCAGTTTACAAGGGAAAGTTTGAAGATGGACAAGAAATTGCAATAAAAAGATTATCTAGGTCATCTGGACAGGGTGTGGAAGAATTTATCAATGAAGTGGAGTTGATTTCTAAGCTTGAACACCAAAACCTAGTCACACTTCTTGGCTGTTGCATTGAAGGGGAAGAAGTGATATTGGTTTATGAATTCATGCCAAACAAAAGTTTGGATGAACATATCTTCGATCCACTACAACAAAAATCTTTAGATTGGGGGAAGCGCTGCAACATAATAGAAGGAATAGCTAGAGGATTGCTCTATCTTCACAGAGATTCAAGATTAAGAATCATACATAGGGATTTGAAGGCAAGTAACATCTTATTAGATGAAAAACTGAATCCAAAGATATCAGATTTTGGACTAGCTAAACTTTTTGGAGGAGATGAGGATCAAGCAAACACTAAAAGAATTGTTGGAACATATGGCTACATTTCTCCAGAATATGCAACAGAAGGGCTCTATTCAGAGAAATCTGATGTCTTTAGCTTTGGCATTTTGTTACTAGAGGTTATTACTGGAAGAAAAAACACTAGCTTTTATGAAGATGCAGAGTCTCTCACACTTTTAGGATTCGTCTTCTCTGTGTGCAAGAACTTGCAAAAGATAGGCCCACTATGGCCTCTGTGA 2241 0.3913 MLFVGFSENTCLLLAFLIYSFTFTLMVSGLDTVAPSVLIQEPETVSSNNGMFTLGFFRPQNSTRCYLGIWFMSESFVVWVANENDPLTDSSGILTISGNGNLVVLNGQKQVVWSTNVSTASNSSAQLLDSGNLVLIDRTTGAFLWQSFQHPSNTLLEGMKLSTNKKTGKKMLLTSWKSTSDPSYGGFSLSLEPHNVTEMFVWKENHPYWRSGPWDGTAFLGIPWMTQSIFQNGVQIKEEEGIYNISYDQTNKAILVTIILDSQGIVKPMIWNSKANIWEPQRKGFHSECDVYGICGPSGICSKRGSPPICSCLKGFEPKNKEEWARRNWTSGCMRREALQCERDKYGSQASKPDGYFKLEKIKPPDHAELLLSISGDIIDCQIMCLKNCSCIAYAYERRIGCMVWNEDLLDLQIFPFRGVDLCIRLAHSELGIDRRKMTAAILISVLIGIVLITAFGYFLWKKVSKQKGDSFFHWEMHLQIHNSKRMRNLKQVKIQDLSLFDFRKLATATNNFDIANKLGQGGFGPVYKGKFEDGQEIAIKRLSRSSGQGVEEFINEVELISKLEHQNLVTLLGCCIEGEEVILVYEFMPNKSLDEHIFDPLQQKSLDWGKRCNIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDEKLNPKISDFGLAKLFGGDEDQANTKRIVGTYGYISPEYATEGLYSEKSDVFSFGILLLEVITGRKNTSFYEDAESLTLLGFVFSVCKNLQKIGPLWPL 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3744g00004 746 CDD B_lectin 43 151 IPR001480 -
Pral3744g00004 746 Pfam PAN-like domain 351 412 IPR003609 -
Pral3744g00004 746 SMART serkin_6 513 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3744g00004 746 Pfam Protein kinase domain 515 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3744g00004 746 SMART ntp_6 351 426 IPR003609 -
Pral3744g00004 746 SMART blect_4 36 151 IPR001480 -
Pral3744g00004 746 ProSiteProfiles PAN/Apple domain profile. 341 427 IPR003609 -
Pral3744g00004 746 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 17 715 - -
Pral3744g00004 746 ProSiteProfiles Bulb-type lectin domain profile. 30 148 IPR001480 -
Pral3744g00004 746 Pfam D-mannose binding lectin 77 177 IPR001480 -
Pral3744g00004 746 Gene3D Phosphorylase Kinase; domain 1 474 588 - -
Pral3744g00004 746 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 182 IPR036426 -
Pral3744g00004 746 FunFam Lectin-domain containing receptor kinase A4.3 589 741 - -
Pral3744g00004 746 SUPERFAMILY Protein kinase-like (PK-like) 497 722 IPR011009 -
Pral3744g00004 746 Gene3D Transferase(Phosphotransferase) domain 1 589 740 - -
Pral3744g00004 746 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 477 588 - -
Pral3744g00004 746 ProSiteProfiles Protein kinase domain profile. 513 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3744g00004 746 Pfam S-locus glycoprotein domain 209 320 IPR000858 GO:0048544
Pral3744g00004 746 PIRSF SRK 5 742 IPR024171 GO:0004674
Pral3744g00004 746 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 26 148 - -
Pral3744g00004 746 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Pral3744g00004 746 Gene3D - 27 149 IPR036426 -
Pral3744g00004 746 CDD PAN_AP_plant 339 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3744g00004 Pral-Chr3744 162704 166604 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3744g00004 501 720 Receptor kinase-like Gene Family AT4G05200 66.364 1.06e-96 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3744g00004 Pkinase 1.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3744g00004 - - qsa:O6P43_012541 810.446