Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3734g00004 ATGGAAGGTTTCTTTCCCGACAAATTTCTGGACGATACTTTCTGTGATGAATCTTTTCAAAATCAGAATGATTTTCTTCAGTTTACAGAGACTGAGACTCGCCAAGAAAGCTTCCATGTCGGATCGAGTTCCCAGAACCCTATTGTCGAAGACGAGCTTTCCGCCGCCGCCGCCGCCCCTCCTCCTGCTCCTGCTGCCGCTAATAAGAGTGATTTTCTTCAGTATAGTGACTGTCTCAGAGCTGTGTTCGGGCAAGAAAGTTCTCAGAATGTGTTGAATTCAAATGAAGTTGCTTTTGTTCCATACAATGACGTACCAGGAACGGGATCGGAATCGGGGCAAGAAAATTCACGTGGCATTAACGCGAAAGATCGTGGCCATGGAGCTTCTCCTGCTGGGAATCGAAGTGATTTTGTTCAATACAGAGAGCTACCCAGAACAGAGTATAGTCAGGGAAGTTCAGATGTTATGAACATGAGAAGGAGGATGATTGATTACTTGAACAGTTGTCCTGCAGAGAGAGGCAACATGGCAGAGTACGAAAGAGAACGAGGTTTCAGGCACATGATTAACGAGAGAATGAGAAGGCAGAGACAGAGGCAGTGTTGCTTGGCCTTGCATTCTATATTACCATTTGGAACCAAGAACGACGTTAATTCGGTGGTTCAAATGGCAGCGAAGGAGATCCAGAAGCTACAAGCTTGCAGGGATGAATTGAAGAAGCAAAATGCAGAGCTTGAAGAAAAACTTAACAGTGAACAAGGCAACAGAGTTGAGTTGAGGCTGGCTCATTCCACGTCTCCAATAGATTCAGTGCTTGAGACTCTTCAATTATTGACGGATCTTGGGATGAATACCAGAAGCATCACCTCAAATTTCTCTCATCAGGAATTGTTTGCCTTGTTAGAGATGCATGCTAATAAGATGGGAGGAGCCGAAGTAGAAAGGGGAAATGAGGATGCGGAGAACGAAAATGAATGGAAGCTTCCTTCTCATGACCGAGAAATTCTCAAAAGGCAGCGACTCTGA 1029 0.45 MEGFFPDKFLDDTFCDESFQNQNDFLQFTETETRQESFHVGSSSQNPIVEDELSAAAAAPPPAPAAANKSDFLQYSDCLRAVFGQESSQNVLNSNEVAFVPYNDVPGTGSESGQENSRGINAKDRGHGASPAGNRSDFVQYRELPRTEYSQGSSDVMNMRRRMIDYLNSCPAERGNMAEYERERGFRHMINERMRRQRQRQCCLALHSILPFGTKNDVNSVVQMAAKEIQKLQACRDELKKQNAELEEKLNSEQGNRVELRLAHSTSPIDSVLETLQLLTDLGMNTRSITSNFSHQELFALLEMHANKMGGAEVERGNEDAENENEWKLPSHDREILKRQRL 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3734g00004 342 Coils Coil 222 263 - -
Pral3734g00004 342 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 179 247 IPR036638 GO:0046983
Pral3734g00004 342 Pfam Helix-loop-helix DNA-binding domain 187 233 IPR011598 GO:0046983
Pral3734g00004 342 Gene3D - 183 261 IPR036638 GO:0046983
Pral3734g00004 342 SMART finulus 189 238 IPR011598 GO:0046983
Pral3734g00004 342 MobiDBLite consensus disorder prediction 104 137 - -
Pral3734g00004 342 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 183 232 IPR011598 GO:0046983
Pral3734g00004 342 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 19 316 IPR044658 -
Pral3734g00004 342 CDD bHLH_AtbHLH_like 181 239 IPR045239 -
Pral3734g00004 342 MobiDBLite consensus disorder prediction 313 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3734g00004 Pral-Chr3734 84032 86250 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3734g00004 153 304 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G43650 39.873 8.65e-31 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3734g00004 - - pcin:129309902 478.789