Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3730g00036 ATGTTGGATCTCAATGTCGAAATGGAAGGTTCTCAGCCCCAAAGGGAAGAAGACTCTGGGTCTGGGACTTCCAATTCCTCTTTGCTGAATTTCGAAGAATCTCGAGACGAAGATTCTTCTGCTTTCGTATTCGACATACTGAAGAGAGAAACAGATTGCCGGGTTGAGGATGAAGAGAAGGAAACGCTAGAAATCACGGCAAAGCCACTTTTCCCTGTGAATAGTGATGACAAGGGACGCAGAGATTGTGATTTCCGATTGGGATTATCATGTTCGAGAAGTAATCAATGGCTGAACCTGTCATTCGCTGAGAGTGGTGCTGCTGGCACGCAAGCTGAATTGAGCGCGTTGCAGCAAAAGCAACCCCAAATCAGGAAAAGCAGAAGAGGGCCCAGGTCTCGAAGCTCACAGTACAGGGGTGTTACTTTCTACCGCAGAACTGGTCGATGGGAATCCCATATATGGGATTGTGGGAAGCAGGTCTATTTAGGTGGATTCGACACTGCACATACCGCCGCAAGAGCATATGATAGGGCTGCAATTAAGTTCAGAGGAGTTGATGCTGATATAAACTTCAGTCTGAGTGATTATGAGGAAGACATGAAGATGATGAAAAGTTTGAGCAAAGAGGAGTTTGTCCAAGTCCTTCGCCGCCAATGCTCCGGTATCCCAAGAGGGAGCTCAAAATATAGAGGTCTATCTCTCAACAAATGGGGTCAATGGGAAGCACAAACCAGCCCTTTCGTTGGCAAAAAGCTTTATGACAAGCTACCCATCAAGAGTGATGGAAGAGGATTGGTAACTAGCTTTGAGCCTAGCAAGGGAGAGAGAACTATTGAATCCAGCAGAGGAGGGAATTATCAAAATCTTGATTTGAGCCTTGGAATTTCTCCACCTTGTAATGAATCCAAGAAGAATGATGCTGCGAGAGGCCTTTCTCTTCGTTATACAGCTTGTGAGACACCAAACAAGGGAGGGCAAATGGCTGATAGCACTGGTGCTTCATTAATAAGGGGACAAGCCATTTATGGTGTGGAAATGCCATCTAAATATGACCAAATATGCTCTGGCTTGTATCCCGGTTATGTACAGGATTATGAGGAGAAGGCCATAGAAAAGAGAGCTGAAGTTGTTCCTCTATCAAGATTCCCAAATTTGGCTTGGCAACTTCACAGCAACGGCAGCATCGTGCCGGTGCCGGTTTTTCCCAATGCAGCATCATCAAAATTCAGTTCTTCTAGCAACAATGGTGGACCAGGCCCACATCCAATCAACCCATATCGTCATAACAATTCTACCCATAATTTGTGGTTCAGTTCAACACCAACATCCACGGTTAATGACTCCCCAAGTTGCGAGTCTTAG 1365 0.4557 MLDLNVEMEGSQPQREEDSGSGTSNSSLLNFEESRDEDSSAFVFDILKRETDCRVEDEEKETLEITAKPLFPVNSDDKGRRDCDFRLGLSCSRSNQWLNLSFAESGAAGTQAELSALQQKQPQIRKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHTAARAYDRAAIKFRGVDADINFSLSDYEEDMKMMKSLSKEEFVQVLRRQCSGIPRGSSKYRGLSLNKWGQWEAQTSPFVGKKLYDKLPIKSDGRGLVTSFEPSKGERTIESSRGGNYQNLDLSLGISPPCNESKKNDAARGLSLRYTACETPNKGGQMADSTGASLIRGQAIYGVEMPSKYDQICSGLYPGYVQDYEEKAIEKRAEVVPLSRFPNLAWQLHSNGSIVPVPVFPNAASSKFSSSSNNGGPGPHPINPYRHNNSTHNLWFSSTPTSTVNDSPSCES 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3730g00036 454 MobiDBLite consensus disorder prediction 407 454 - -
Pral3730g00036 454 SMART rav1_2 137 199 IPR001471 GO:0003700|GO:0006355
Pral3730g00036 454 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 107 307 - -
Pral3730g00036 454 SUPERFAMILY DNA-binding domain 136 194 IPR016177 GO:0003677
Pral3730g00036 454 CDD AP2 137 192 IPR001471 GO:0003700|GO:0006355
Pral3730g00036 454 MobiDBLite consensus disorder prediction 15 30 - -
Pral3730g00036 454 Gene3D AP2/ERF domain 136 195 IPR036955 GO:0003700|GO:0006355
Pral3730g00036 454 MobiDBLite consensus disorder prediction 117 137 - -
Pral3730g00036 454 FunFam AP2-like ethylene-responsive transcription factor 136 195 - -
Pral3730g00036 454 MobiDBLite consensus disorder prediction 1 35 - -
Pral3730g00036 454 ProSiteProfiles AP2/ERF domain profile. 137 193 IPR001471 GO:0003700|GO:0006355
Pral3730g00036 454 Pfam AP2 domain 137 185 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3730g00036 Pral-Chr3730 358932 363100 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3730g00036 1 431 AP2-EREBP Transcription Factor Family AT5G60120 38.589 8.19e-66 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral3730g00036 AP2 6.5e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3730g00036 K09284 - qsu:112017577 369.392