Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3730g00015 ATGGCCACAAAAGCAACTAGCAGCTCCGCCATCGCGGCGGCTGTATTTATGGTGGCCGCTCTGATCACCACCGTCCTCTCTGACGACATGCTTCCAGTTCCCGGCGACAAGTCCCAACTTACGAAATGGTTCAACGACAACGTGAAGCCACTGTCGTCGGCACAGCTTGAAATGAATAATAATAAGGGCCTAAGAATAATAAACCCTAAACTTGCAGCTGCAGAAAAACGAGTGAAGGTGGTGAAGGTGAAGAAAGATGGAAGCGGAGACTTCAAGACGGTGTCAGACGCCATTAAAGCCATCCCTGAAGGTAACAGGAGGAGAGTAATAGTGTATGTTGGAAGTGGGACTTACTTTGAGAAAATAAAGATAGAGAAGACGAAGCCTTTTGTAACTCTGTTTGGCGATCCTAAGAATTTCCCAAACTTGACCTTCGATGGAACTGCACAAAGATTTGGAACTGTGGATAGTGCTTCCTTGATTGTTGAATCCGACTATTTCGTTGCTGCCAATCTCGTTATTTCGATGCATTCGGCACCAATCCCATTACTTGTCAGATTCACACCCAACGACTGA 576 0.4618 MATKATSSSAIAAAVFMVAALITTVLSDDMLPVPGDKSQLTKWFNDNVKPLSSAQLEMNNNKGLRIINPKLAAAEKRVKVVKVKKDGSGDFKTVSDAIKAIPEGNRRRVIVYVGSGTYFEKIKIEKTKPFVTLFGDPKNFPNLTFDGTAQRFGTVDSASLIVESDYFVAANLVISMHSAPIPLLVRFTPND 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3730g00015 191 SUPERFAMILY Pectin lyase-like 80 174 IPR011050 -
Pral3730g00015 191 Gene3D - 27 180 IPR012334 -
Pral3730g00015 191 Pfam Pectinesterase 81 176 IPR000070 GO:0030599|GO:0042545
Pral3730g00015 191 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 73 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3730g00015 Pral-Chr3730 143007 144910 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3730g00015 25 182 Carbohydrate Esterase AT5G07410 46.835 7.93e-44 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3730g00015 K01051 - gmx:100813174 183.726